RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 TRAPPC11Q7Z392 1133 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 SPATA2LQ8IUW3 424 aaPredicted RBP6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 WDR49Q8IV35 697 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 C1orf210Q8IVY1 113 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 MFSD6LQ8IWD5 586 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 SCN4BQ8IWT1 228 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 TMEM86AQ8N2M4 240 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 TOP6BLQ8N6T0 577 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 XXYLT1Q8NBI6 393 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 CSGALNACT1Q8TDX6 532 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 C2orf15Q8WU43 125 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 DEPDC1BQ8WUY9 529 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 CPLX3Q8WVH0 158 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 DNASE1L2Q92874 299 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 NKD2Q969F2 451 aaPredicted RBP6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 PAGE5Q96GU1 130 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 ZFYVE19Q96K21 471 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 FERD3LQ96RJ6 166 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 FNBP1Q96RU3 617 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 MMS19Q96T76 1030 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 CGRRF1Q99675 332 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 ACBD6Q9BR61 282 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 DDX23Q9BUQ8 820 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 SRRTQ9BXP5 876 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 CEP41Q9BYV8 373 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 GPR88Q9GZN0 384 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 TRPV4Q9HBA0 871 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 KIAA1586Q9HCI6 787 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 GDAP2Q9NXN4 497 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 HSFX1Q9UBD0 423 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 PPT2Q9UMR5 302 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 PIAS3Q9Y6X2 628 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 F5P12259 2224 aa6.9□□□□□ -1.3
SOX2-OT-210ENST00000487240 VPS13AQ96RL7 3174 aa6.9□□□□□ -1.31
SOX2-OT-210ENST00000487240 FAM186AA6NE01 2351 aa6.9□□□□□ -1.31
SOX2-OT-210ENST00000487240 EP300Q09472 2414 aaPredicted RBP6.9□□□□□ -1.31
SOX2-OT-210ENST00000487240 ZNF292O60281 2723 aa6.9□□□□□ -1.31
SOX2-OT-210ENST00000487240 CACNA1IQ9P0X4 2223 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 MYBPHLA2RUH7 354 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 PROB1E7EW31 1015 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 MAN2B1O00754 1011 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 LAMTOR5O43504 91 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 KLRC4O43908 158 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 ATE1O95260 518 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 CST3P01034 146 aaPredicted RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 SP9P0CG40 484 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 HMGA1P17096 107 aaKnown RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 CMA1P23946 247 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 CCNE1P24864 410 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 LMO2P25791 158 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 PCSK1P29120 753 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 NOS3P29474 1203 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 SYKP43405 635 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 PREPP48147 710 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 LHX1P48742 406 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 CASP4P49662 377 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 NDUFA8P51970 172 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 KPNA1P52294 538 aaPredicted RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 RPL10AP62906 217 aaKnown RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 TNNC1P63316 161 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 CYP27A1Q02318 531 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 CSTF1Q05048 431 aaKnown RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 STK4Q13043 487 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 BIRC3Q13489 604 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 TRPC3Q13507 836 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 PSMD6Q15008 389 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 NFE2Q16621 373 aaPredicted RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 KNOP1Q1ED39 458 aaKnown RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 BMT2Q1RMZ1 405 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 TSSK4Q6SA08 328 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 CCDC81Q6ZN84 652 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 Q6ZS46 218 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 MAB21L3Q8N8X9 362 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 FSIP1Q8NA03 581 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 KIAA0895Q8NCT3 520 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 KBTBD7Q8WVZ9 684 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 WFDC12Q8WWY7 111 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 FAM3CQ92520 227 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 UBXN4Q92575 508 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 MRPS31Q92665 395 aaKnown RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 MYLPFQ96A32 169 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 E2F7Q96AV8 911 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 LRRC3BQ96PB8 259 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 PKMYT1Q99640 499 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 SYT15Q9BQS2 421 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 MRPL45Q9BRJ2 306 aaKnown RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 SLC46A2Q9BY10 475 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 SNX25Q9H3E2 840 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 TASP1Q9H6P5 420 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 TRPC7Q9HCX4 862 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 MRPS17Q9Y2R5 130 aaKnown RBP6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 CORINQ9Y5Q5 1042 aa6.89□□□□□ -1.31
SOX2-OT-210ENST00000487240 COL4A2P08572 1712 aa6.88□□□□□ -1.31
SOX2-OT-210ENST00000487240 SHISA7A6NL88 538 aa6.88□□□□□ -1.31
SOX2-OT-210ENST00000487240 LRRIQ3A6PVS8 624 aaPredicted RBP6.88□□□□□ -1.31
SOX2-OT-210ENST00000487240 ARNTLO00327 626 aa6.88□□□□□ -1.31
SOX2-OT-210ENST00000487240 GABRDO14764 452 aa6.88□□□□□ -1.31
SOX2-OT-210ENST00000487240 FANCGO15287 622 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms