RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 USP36Q9P275 1121 aaKnown RBP20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 DNMT3LQ9UJW3 386 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 PCDHA5Q9Y5H7 936 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 DSPP15924 2871 aaKnown RBP20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 A0A1B0GTW7 788 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 STC2O76061 302 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 ASS1P00966 412 aaKnown RBP20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 RPN1P04843 607 aaKnown RBP20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 NCAM1P13591 858 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 IL12RB1P42701 662 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 STARD3Q14849 445 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 C10orf120Q5SQS8 335 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 ZCCHC9Q8N567 271 aaKnown RBP20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 SPRYD3Q8NCJ5 442 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 TAF4BQ92750 862 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 GPR174Q9BXC1 333 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 MKRN2Q9H000 416 aaKnown RBP20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 PRDM16Q9HAZ2 1276 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 SLC27A6Q9Y2P4 619 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 GPSM3Q9Y4H4 160 aa20.47■□□□□ 0.87
SMPDL3A-202ENST00000487215 CBFA2T3O75081 653 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 PENKP01210 267 aaPredicted RBP20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 KLKB1P03952 638 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 AFMP43652 599 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 MFAP3P55082 362 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 GEN1Q17RS7 908 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 FYB2Q5VWT5 728 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 CCNI2Q6ZMN8 369 aaPredicted RBP20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 SV2AQ7L0J3 742 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 SCD5Q86SK9 330 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 SLC9A9Q8IVB4 645 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 PNPLA8Q9NP80 782 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 ITM2CQ9NQX7 267 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 THAP10Q9P2Z0 257 aaPredicted RBP20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 NAGPAQ9UK23 515 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 PCOLCE2Q9UKZ9 415 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 NFE2L3Q9Y4A8 694 aa20.46■□□□□ 0.87
SMPDL3A-202ENST00000487215 KCNJ18B7U540 433 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 INCA1Q0VD86 236 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 ENPP2Q13822 863 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 C19orf48Q6RUI8 117 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 GLRX5Q86SX6 157 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 GRAMD1CQ8IYS0 662 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 KIAA0895Q8NCT3 520 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 CADM4Q8NFZ8 388 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 TMEM174Q8WUU8 243 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 CYFIP2Q96F07 1278 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 MIR1-1HGQ9H1L0 117 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 IL21RQ9HBE5 538 aa20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 APOBEC2Q9Y235 224 aaKnown RBP20.45■□□□□ 0.86
SMPDL3A-202ENST00000487215 ITPR1Q14643 2758 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 NPC1O15118 1278 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 KLRC4O43908 158 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 HLA-DRAP01903 254 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 TRIM21P19474 475 aaKnown RBP20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 PIK3CAP42336 1068 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 TPMTP51580 245 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 KIF11P52732 1056 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 ZNF132P52740 706 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 STK4Q13043 487 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 C1orf220Q5T0J3 134 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 DCAF12L1Q5VU92 463 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 CCDC186Q7Z3E2 898 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 TADA2BQ86TJ2 420 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 SLCO6A1Q86UG4 719 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 TMC2Q8TDI7 906 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 BACH2Q9BYV9 841 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 KCTD10Q9H3F6 313 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 CCDC86Q9H6F5 360 aaKnown RBP20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 NBEAQ8NFP9 2946 aa20.44■□□□□ 0.86
SMPDL3A-202ENST00000487215 NR3C1P04150 777 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 PSEN1P49768 467 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 BNC1Q01954 994 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 TMPRSS6Q8IU80 811 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 ZNF276Q8N554 614 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 SETD7Q8WTS6 366 aaKnown RBP20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 UCMAQ8WVF2 138 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 SIPA1Q96FS4 1042 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 NT5C1AQ9BXI3 368 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 GAREM1Q9H706 876 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 FAM13BQ9NYF5 915 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 CLIC5Q9NZA1 410 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 RASAL2Q9UJF2 1139 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 ZNF510Q9Y2H8 683 aa20.43■□□□□ 0.86
SMPDL3A-202ENST00000487215 METTL12A8MUP2 240 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 IKBKBO14920 756 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 BCAT2O15382 392 aaPredicted RBP20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 SYNCRIPO60506 623 aaKnown RBP20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 IGLV3-19P01714 112 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 HMBSP08397 361 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 ZNF883P0CG24 379 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 RALAP11233 206 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 OXTRP30559 389 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 CORO1AP31146 461 aaKnown RBP20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 CHKAP35790 457 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 COPAP53621 1224 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 ZNF234Q14588 700 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 ANKS1BQ7Z6G8 1248 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 CACUL1Q86Y37 369 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 MDM1Q8TC05 714 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms