RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 Q6ZS52 159 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 FMNL3Q8IVF7 1028 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 C1orf210Q8IVY1 113 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 SCUBE3Q8IX30 993 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 FAM71AQ8IYT1 594 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 MSANTD4Q8NCY6 345 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 IRGQQ8WZA9 623 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 PLD4Q96BZ4 506 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 FUCA2Q9BTY2 467 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 BBS2Q9BXC9 721 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 STK33Q9BYT3 514 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 DCLK3Q9C098 648 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 CBX8Q9HC52 389 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 SEPT11Q9NVA2 429 aaKnown RBP10.68□□□□□ -0.7
NEK4-204ENST00000487068 PCDHGC3Q9UN70 934 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 SIK3Q9Y2K2 1263 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 DAAM1Q9Y4D1 1078 aa10.68□□□□□ -0.7
NEK4-204ENST00000487068 SYNJ2BP-COX16A0A087WUM0 186 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 MED19A0JLT2 244 aaPredicted RBP10.67□□□□□ -0.7
NEK4-204ENST00000487068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.67□□□□□ -0.7
NEK4-204ENST00000487068 EPHB6O15197 1021 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 EGFP01133 1207 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 CYP11B1P15538 503 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 DRD1P21728 446 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 SOX5P35711 763 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 HARS2P49590 506 aaKnown RBP10.67□□□□□ -0.7
NEK4-204ENST00000487068 CCR3P51677 355 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 SEC13P55735 322 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 GAD2Q05329 585 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 MTAPQ13126 283 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 OR6B2Q6IFH4 312 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 TOGARAM2Q6ZUX3 1019 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 BHLHA9Q7RTU4 235 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 DGLUCYQ7Z3D6 616 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 DENND1CQ8IV53 801 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 SCML4Q8N228 414 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 KIAA1958Q8N8K9 716 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 NAT16Q8N8M0 369 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 TMEM35BQ8NCS4 154 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 WBP2Q969T9 261 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 RMDN1Q96DB5 314 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 PPP1R13BQ96KQ4 1090 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 CPXM1Q96SM3 734 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 IER2Q9BTL4 223 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 NAA15Q9BXJ9 866 aaKnown RBP10.67□□□□□ -0.7
NEK4-204ENST00000487068 HSD3B7Q9H2F3 369 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 CHRDQ9H2X0 955 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 SPHK2Q9NRA0 654 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 COX16Q9P0S2 106 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 DLGAP2Q9P1A6 1054 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 CYTH4Q9UIA0 394 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 ZNF510Q9Y2H8 683 aa10.67□□□□□ -0.7
NEK4-204ENST00000487068 SHISA7A6NL88 538 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 TRDMT1O14717 391 aaKnown RBP10.66□□□□□ -0.7
NEK4-204ENST00000487068 TEX33O43247 280 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 RNF40O75150 1001 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 GRAP2O75791 330 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 CAVIN2O95810 425 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 MOCS2O96007 188 aaPredicted RBP10.66□□□□□ -0.7
NEK4-204ENST00000487068 CYBBP04839 570 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 APODP05090 189 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 MMEP08473 750 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 CHRNB1P11230 501 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 CHKAP35790 457 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 GALK1P51570 392 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 CSTF1Q05048 431 aaKnown RBP10.66□□□□□ -0.7
NEK4-204ENST00000487068 IQCB1Q15051 598 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 NFKBIBQ15653 356 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 TMEM196Q5HYL7 178 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 NAA35Q5VZE5 725 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 FSTL4Q6MZW2 842 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 FAM183BPQ6ZVS7 135 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 HTR3DQ70Z44 454 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 NOP9Q86U38 636 aaKnown RBP10.66□□□□□ -0.7
NEK4-204ENST00000487068 ADGRG2Q8IZP9 1017 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 ADAM32Q8TC27 787 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 EPS8L1Q8TE68 723 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 STK32AQ8WU08 396 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 CLDN23Q96B33 292 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 SERPINB11Q96P15 392 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 XPO6Q96QU8 1125 aaKnown RBP10.66□□□□□ -0.7
NEK4-204ENST00000487068 ERGIC2Q96RQ1 377 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 HINFPQ9BQA5 517 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 SLC4A5Q9BY07 1137 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 TSPY26PQ9H489 355 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 FAM204AQ9H8W3 233 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 POPDC2Q9HBU9 364 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 ARHGEF4Q9NR80 690 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 DNAJC17Q9NVM6 304 aaKnown RBP10.66□□□□□ -0.7
NEK4-204ENST00000487068 PLK2Q9NYY3 685 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 TJP2Q9UDY2 1190 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 HBS1LQ9Y450 684 aaKnown RBP10.66□□□□□ -0.7
NEK4-204ENST00000487068 THADAQ6YHU6 1953 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 DOCK4Q8N1I0 1966 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 GVINP1Q7Z2Y8 2422 aa10.66□□□□□ -0.7
NEK4-204ENST00000487068 GOLGA8SH3BPF8 625 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 HOXC11O43248 304 aaPredicted RBP10.65□□□□□ -0.7
NEK4-204ENST00000487068 PAPSS1O43252 624 aaPredicted RBP10.65□□□□□ -0.7
NEK4-204ENST00000487068 GABBR2O75899 941 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 LSM8O95777 96 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms