RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CDO1Q16878 200 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 C10orf120Q5SQS8 335 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 DAB2IPQ5VWQ8 1189 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 CYP4V2Q6ZWL3 525 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-227ENST00000486806 RSRC2Q7L4I2 434 aaKnown RBP9.98□□□□□ -0.81
MCF2L-227ENST00000486806 NPAS3Q8IXF0 933 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 TRIM58Q8NG06 486 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-227ENST00000486806 ADAM32Q8TC27 787 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 RNF139Q8WU17 664 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 CD101Q93033 1021 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 SLC39A13Q96H72 371 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 SLC46A2Q9BY10 475 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 RNF38Q9H0F5 515 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 TASP1Q9H6P5 420 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 UBE2ZQ9H832 354 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-227ENST00000486806 FAM204AQ9H8W3 233 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 PIGVQ9NUD9 493 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 DDIT4Q9NX09 232 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 MARCH2Q9P0N8 246 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 SFMBT1Q9UHJ3 866 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 ZMYM5Q9UJ78 669 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 RASAL2Q9UJF2 1139 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 DNMT3LQ9UJW3 386 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 MRPS23Q9Y3D9 190 aaKnown RBP9.98□□□□□ -0.81
MCF2L-227ENST00000486806 OBSL1O75147 1896 aa9.98□□□□□ -0.81
MCF2L-227ENST00000486806 TRAV19A0A0A6YYK7 116 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 I6L893 689 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-227ENST00000486806 M0QYT0 321 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 FANCGO15287 622 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 KIF5CO60282 957 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 TCF4P15884 667 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 COMTP21964 271 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 FSHRP23945 695 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 WEE1P30291 646 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 ATP5C1P36542 298 aaKnown RBP9.97□□□□□ -0.81
MCF2L-227ENST00000486806 MTHFRP42898 656 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 CXCR3P49682 368 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 NAP1L1P55209 391 aaKnown RBP9.97□□□□□ -0.81
MCF2L-227ENST00000486806 ZXDBP98169 803 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 DEUP1Q05D60 604 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 EFEMP1Q12805 493 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 TRIP4Q15650 581 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-227ENST00000486806 ARHGAP15Q53QZ3 475 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 GPR158Q5T848 1215 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 CES5AQ6NT32 575 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 DAAM2Q86T65 1068 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 NT5DC3Q86UY8 548 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 SYCE1Q8N0S2 351 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 ARL14EPQ8N8R7 260 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-227ENST00000486806 MAB21L3Q8N8X9 362 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 ADAMTS19Q8TE59 1207 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 ING5Q8WYH8 240 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 FCRL2Q96LA5 508 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-227ENST00000486806 RIPOR3Q96MK2 946 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 NECTIN4Q96NY8 510 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 ALS2CR12Q96Q35 445 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 PEBP4Q96S96 227 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 POMKQ9H5K3 350 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 TRPC7Q9HCX4 862 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 TMEM51Q9NW97 253 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 CD207Q9UJ71 328 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 ARHGAP26Q9UNA1 814 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 TLR6Q9Y2C9 796 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 HBS1LQ9Y450 684 aaKnown RBP9.97□□□□□ -0.81
MCF2L-227ENST00000486806 USP15Q9Y4E8 981 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-227ENST00000486806 HYOU1Q9Y4L1 999 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 ALG6Q9Y672 507 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 NOTCH4Q99466 2003 aa9.97□□□□□ -0.81
MCF2L-227ENST00000486806 DENND4AQ7Z401 1863 aa9.96□□□□□ -0.81
MCF2L-227ENST00000486806 MYH10P35580 1976 aa9.96□□□□□ -0.81
MCF2L-227ENST00000486806 ZNF638Q14966 1978 aaKnown RBP9.96□□□□□ -0.81
MCF2L-227ENST00000486806 C2orf16Q68DN1 1984 aa9.96□□□□□ -0.81
MCF2L-227ENST00000486806 GRXCR2A6NFK2 248 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 TMEM110-MUSTN1A8MSY1 372 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 KCNU1A8MYU2 1149 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 H3BQ06 376 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-227ENST00000486806 GREM1O60565 184 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 RNF8O76064 485 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 PRAMEF12O95522 483 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 FTCDO95954 541 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 F9P00740 461 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 CKMP06732 381 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 TCF3P15923 654 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 DESP17661 470 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 HDCP19113 662 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 KCNA5P22460 613 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 IL1R2P27930 398 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 MIPP30301 263 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 GBP1P32455 592 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 CTNNA1P35221 906 aaKnown RBP9.96□□□□□ -0.82
MCF2L-227ENST00000486806 KPNA1P52294 538 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-227ENST00000486806 TAS2R40P59535 323 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 RING1Q06587 406 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 SCAPQ12770 1279 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 USP4Q13107 963 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 NME3Q13232 169 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 SMAD4Q13485 552 aaKnown RBP9.96□□□□□ -0.82
MCF2L-227ENST00000486806 PPP2R5DQ14738 602 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms