RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TXNDC8Q6A555 127 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 ZNF662Q6ZS27 426 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 BEND5Q7L4P6 421 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 ARCQ7LC44 396 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 ZNF564Q8TBZ8 553 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-229ENST00000486665 KIAA1524Q8TCG1 905 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 RFFLQ8WZ73 363 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 GOLGA1Q92805 767 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 ATOH1Q92858 354 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-229ENST00000486665 TRIM44Q96DX7 344 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-229ENST00000486665 PRRX2Q99811 253 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 RNF38Q9H0F5 515 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 LZTFL1Q9NQ48 299 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 ABCC13Q9NSE7 274 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 CLIC5Q9NZA1 410 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 UVRAGQ9P2Y5 699 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 SORCS3Q9UPU3 1222 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 NR2E1Q9Y466 385 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 CAPN9O14815 690 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 BUB1O43683 1085 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 RALAP11233 206 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 CEBPBP17676 345 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 GPD1P21695 349 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 CDC25CP30307 473 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 NOS2P35228 1153 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 MATKP42679 507 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 PSEN1P49768 467 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 ITIH3Q06033 890 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 C15orf59Q2T9L4 293 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-229ENST00000486665 HECTD3Q5T447 861 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 SH3PXD2AQ5TCZ1 1133 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 OTUD1Q5VV17 481 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-229ENST00000486665 CES5AQ6NT32 575 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 CPNE8Q86YQ8 564 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 RHOT2Q8IXI1 618 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 CCAR2Q8N163 923 aaKnown RBP13.34□□□□□ -0.27
HDAC6-229ENST00000486665 ZNF276Q8N554 614 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 LEMD2Q8NC56 503 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 ADAM32Q8TC27 787 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 DQX1Q8TE96 717 aaKnown RBP13.34□□□□□ -0.27
HDAC6-229ENST00000486665 ZSWIM3Q96MP5 696 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 CFAP57Q96MR6 1250 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 SLC22A12Q96S37 553 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 CYP2S1Q96SQ9 504 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 SLC46A2Q9BY10 475 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 WDR6Q9NNW5 1121 aaKnown RBP13.34□□□□□ -0.27
HDAC6-229ENST00000486665 CALCOCO1Q9P1Z2 691 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 LIMD1Q9UGP4 676 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 SFMBT1Q9UHJ3 866 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 ANAPC7Q9UJX3 599 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 MRPS23Q9Y3D9 190 aaKnown RBP13.34□□□□□ -0.27
HDAC6-229ENST00000486665 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
HDAC6-229ENST00000486665 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 DPYSL4O14531 572 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ZNF197O14709 1029 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ZSCAN12O43309 604 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 COCHO43405 550 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 GALR2O43603 387 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-229ENST00000486665 TLR5O60602 858 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 MOCS3O95396 460 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 FGF19O95750 216 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 OAS1P00973 400 aaKnown RBP13.33□□□□□ -0.28
HDAC6-229ENST00000486665 FSHRP23945 695 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 MTHFRP42898 656 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ZNF143P52747 638 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-229ENST00000486665 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.28
HDAC6-229ENST00000486665 EFEMP1Q12805 493 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 MESDQ14696 234 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ATAT1Q5SQI0 421 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 C10orf120Q5SQS8 335 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 GPR158Q5T848 1215 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 MSANTD2Q6P1R3 559 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ASCL5Q7RTU5 278 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 TAC4Q86UU9 113 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 TXLNBQ8N3L3 684 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ARFGAP1Q8N6T3 406 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ARL14EPQ8N8R7 260 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-229ENST00000486665 MAB21L3Q8N8X9 362 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 TPCN2Q8NHX9 752 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 RNF139Q8WU17 664 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ING5Q8WYH8 240 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 MRPS31Q92665 395 aaKnown RBP13.33□□□□□ -0.28
HDAC6-229ENST00000486665 NT5C3BQ969T7 300 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 NECTIN4Q96NY8 510 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 GCNAQ96QF7 691 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 TBCBQ99426 244 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 NPY6RQ99463 290 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 IRX2Q9BZI1 471 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-229ENST00000486665 TRPC7Q9HCX4 862 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 GUCA1BQ9UMX6 200 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ZKSCAN5Q9Y2L8 839 aa13.33□□□□□ -0.28
HDAC6-229ENST00000486665 RIF1Q5UIP0 2472 aaKnown RBP13.33□□□□□ -0.28
HDAC6-229ENST00000486665 ZNF638Q14966 1978 aaKnown RBP13.32□□□□□ -0.28
HDAC6-229ENST00000486665 DOCK6Q96HP0 2047 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 DCHS1Q96JQ0 3298 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 TMEM110-MUSTN1A8MSY1 372 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 MYO1FO00160 1098 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 CCP110O43303 1012 aa13.32□□□□□ -0.28
HDAC6-229ENST00000486665 KRT86O43790 486 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms