RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 ZDHHC7Q9NXF8 308 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 LMCD1Q9NZU5 365 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 SLC12A6Q9UHW9 1150 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 GBF1Q92538 1859 aa13.8□□□□□ -0.2
VTI1BP1-201ENST00000486325 LRRD1A4D1F6 860 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZNF487B1APH4 448 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 TLR5O60602 858 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 SLU7O95391 586 aaKnown RBP13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 IGLV3-25P01717 112 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 FGGP02679 453 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 TCF4P15884 667 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 PFKLP17858 780 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 TFE3P19532 575 aaPredicted RBP13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 CDC25CP30307 473 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 CCR1P32246 355 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 PTPN7P35236 360 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 ADRA1BP35368 520 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 GJC1P36383 396 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 EIF4EBP2Q13542 120 aaPredicted RBP13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 KRT81Q14533 505 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 PPP2R5DQ14738 602 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 LONRF2Q1L5Z9 754 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 LRIT3Q3SXY7 679 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 ATP13A4Q4VNC1 1196 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 EFHC2Q5JST6 749 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 C10orf120Q5SQS8 335 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZNF572Q7Z3I7 529 aaPredicted RBP13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 TAC4Q86UU9 113 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 FAM131BQ86XD5 332 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 HSPH1Q92598 858 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 GCNAQ96QF7 691 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 MAK16Q9BXY0 300 aaKnown RBP13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 WDR6Q9NNW5 1121 aaKnown RBP13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 MAN1C1Q9NR34 630 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 HOMER3Q9NSC5 361 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 PIGVQ9NUD9 493 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 OSER1Q9NX31 292 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 DNMT3LQ9UJW3 386 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 FZD10Q9ULW2 581 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 TLR6Q9Y2C9 796 aa13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 HBS1LQ9Y450 684 aaKnown RBP13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 MTCL1Q9Y4B5 1905 aaKnown RBP13.79□□□□□ -0.2
VTI1BP1-201ENST00000486325 GREB1Q4ZG55 1949 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZNF638Q14966 1978 aaKnown RBP13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 MYO7AQ13402 2215 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 TMEM265A0A087WTH1 108 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 SYNJ2BP-COX16A0A087WUM0 186 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 GOLGA6L10A0A0M3HER8 536 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 SOBPA7XYQ1 873 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 IRAK2O43187 625 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 TJP3O95049 919 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 CSPG5O95196 566 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 F11P03951 625 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 PGFP49763 221 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 CDH6P55285 790 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 TBX4P57082 545 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 PITX1P78337 314 aaPredicted RBP13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 COG7P83436 770 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 RING1Q06587 406 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 SCAPQ12770 1279 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 EFEMP1Q12805 493 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZNF211Q13398 564 aaPredicted RBP13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 DUSP6Q16828 381 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 TFDP3Q5H9I0 405 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 KCNT1Q5JUK3 1230 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 DCAF12L1Q5VU92 463 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 SPOCD1Q6ZMY3 1216 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 SLC13A5Q86YT5 568 aaPredicted RBP13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 UNC45BQ8IWX7 931 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 ADAM32Q8TC27 787 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 FAM71BQ8TC56 605 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 RAPGEF5Q92565 580 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 MRPS31Q92665 395 aaKnown RBP13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 CASP10Q92851 521 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 RNF25Q96BH1 459 aaPredicted RBP13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 MS4A14Q96JA4 679 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 HAPLN3Q96S86 360 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 SNRNP25Q9BV90 132 aaKnown RBP13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 CARD6Q9BX69 1037 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 OSBPL8Q9BZF1 889 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 NACA2Q9H009 215 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 ASAH2Q9NR71 780 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 MARCH2Q9P0N8 246 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 COX16Q9P0S2 106 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 RCOR3Q9P2K3 495 aaPredicted RBP13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 ZMYM5Q9UJ78 669 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 AP4E1Q9UPM8 1137 aa13.78□□□□□ -0.2
VTI1BP1-201ENST00000486325 CCDC188H7C350 402 aa13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 PER2O15055 1255 aa13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 SRGAP2BP0DMP2 458 aa13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 EPCAMP16422 314 aa13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 L1CAMP32004 1257 aa13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 ARL4AP40617 200 aa13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 PLXNA3P51805 1871 aa13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 TFDP2Q14188 446 aa13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 DPYSL2Q16555 572 aa13.77□□□□□ -0.21
VTI1BP1-201ENST00000486325 TAZQ16635 292 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms