RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 TRIM58Q8NG06 486 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.23■□□□□ 0.35
THBS3-207ENST00000486260 ALS2CR12Q96Q35 445 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 SLC22A12Q96S37 553 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 CYP2S1Q96SQ9 504 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 CDK5RAP1Q96SZ6 601 aaKnown RBP17.23■□□□□ 0.35
THBS3-207ENST00000486260 NACA2Q9H009 215 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 DDIT4Q9NX09 232 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 MTMR10Q9NXD2 777 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 RASAL2Q9UJF2 1139 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 MRPS23Q9Y3D9 190 aaKnown RBP17.23■□□□□ 0.35
THBS3-207ENST00000486260 DENND4CQ5VZ89 1909 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 MSI1O43347 362 aaKnown RBP17.23■□□□□ 0.35
THBS3-207ENST00000486260 LRCH4O75427 683 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 ENDOD1O94919 500 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 FTCDO95954 541 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 IGLV3-25P01717 112 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 DESP17661 470 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 MAN1A1P33908 653 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 HDAC4P56524 1084 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 GNG11P61952 73 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 DEUP1Q05D60 604 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 ACAP1Q15027 740 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 CLUL1Q15846 466 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 STRADAQ7RTN6 431 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 TADA2BQ86TJ2 420 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 MIB1Q86YT6 1006 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 SYCE1Q8N0S2 351 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 SLC35F6Q8N357 371 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 ITFG1Q8TB96 612 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 PPM1EQ8WY54 764 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 MSLNLQ96KJ4 702 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 MARCH2Q9P0N8 246 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 DNMT3LQ9UJW3 386 aa17.23■□□□□ 0.35
THBS3-207ENST00000486260 PRUNE2Q8WUY3 3088 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 SPOPO43791 374 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 TCF4P15884 667 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 CEBPBP17676 345 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 HDCP19113 662 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 SLC1A1P43005 524 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 SSR1P43307 286 aaKnown RBP17.22■□□□□ 0.35
THBS3-207ENST00000486260 ITIH3Q06033 890 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 GPR158Q5T848 1215 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 CES5AQ6NT32 575 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 KLHDC10Q6PID8 442 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 ARL14EPQ8N8R7 260 aaPredicted RBP17.22■□□□□ 0.35
THBS3-207ENST00000486260 ING5Q8WYH8 240 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 PGAP3Q96FM1 320 aaPredicted RBP17.22■□□□□ 0.35
THBS3-207ENST00000486260 SLC46A2Q9BY10 475 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 PIGVQ9NUD9 493 aa17.22■□□□□ 0.35
THBS3-207ENST00000486260 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.35
THBS3-207ENST00000486260 SLC12A8A0AV02 714 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 ESPNB1AK53 854 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 IRAK2O43187 625 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 MIPP30301 263 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 GBP1P32455 592 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 RDXP35241 583 aaKnown RBP17.21■□□□□ 0.35
THBS3-207ENST00000486260 TAS2R40P59535 323 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 EIF4EBP2Q13542 120 aaPredicted RBP17.21■□□□□ 0.35
THBS3-207ENST00000486260 ARHGAP15Q53QZ3 475 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 ATAT1Q5SQI0 421 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 SCYL2Q6P3W7 929 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 NYAP1Q6ZVC0 841 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 PEX26Q7Z412 305 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 NT5DC3Q86UY8 548 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 C16orf45Q96MC5 204 aaPredicted RBP17.21■□□□□ 0.35
THBS3-207ENST00000486260 SERPINB11Q96P15 392 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 WDR6Q9NNW5 1121 aaKnown RBP17.21■□□□□ 0.35
THBS3-207ENST00000486260 PCSK1NQ9UHG2 260 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 AMFRQ9UKV5 643 aa17.21■□□□□ 0.35
THBS3-207ENST00000486260 OLFM2O95897 454 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 F9P00740 461 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 TNNT1P13805 278 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 FSHRP23945 695 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 PCK1P35558 622 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 CBX2Q14781 532 aaPredicted RBP17.2■□□□□ 0.34
THBS3-207ENST00000486260 SKIV2LQ15477 1246 aaKnown RBP17.2■□□□□ 0.34
THBS3-207ENST00000486260 POTEHQ6S545 545 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 FAM131BQ86XD5 332 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 WDR24Q96S15 920 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 SLITRK6Q9H5Y7 841 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 TASP1Q9H6P5 420 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 PACSIN2Q9UNF0 486 aaPredicted RBP17.2■□□□□ 0.34
THBS3-207ENST00000486260 TRAV19A0A0A6YYK7 116 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 CKMP06732 381 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 HMBSP08397 361 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 MBL2P11226 248 aaPredicted RBP17.2■□□□□ 0.34
THBS3-207ENST00000486260 DDX6P26196 483 aaKnown RBP eCLIP17.2■□□□□ 0.34
THBS3-207ENST00000486260 IL1R2P27930 398 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 ZSWIM3Q96MP5 696 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 PEBP4Q96S96 227 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 GKN1Q9NS71 199 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 SMPD4Q9NXE4 827 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 USP18Q9UMW8 372 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 TLR6Q9Y2C9 796 aa17.2■□□□□ 0.34
THBS3-207ENST00000486260 CLUHO75153 1309 aa17.19■□□□□ 0.34
THBS3-207ENST00000486260 H3BQ06 376 aaPredicted RBP17.19■□□□□ 0.34
THBS3-207ENST00000486260 CXCR3P49682 368 aa17.19■□□□□ 0.34
THBS3-207ENST00000486260 TBX4P57082 545 aa17.19■□□□□ 0.34
THBS3-207ENST00000486260 SLC25A11Q02978 314 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 241.5 ms