RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 NELL2Q99435 816 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 PRRX2Q99811 253 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 BPIFA3Q9BQP9 254 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 CRACR2AQ9BSW2 395 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 INTS2Q9H0H0 1204 aaKnown RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 FBXO44Q9H4M3 255 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 CCSER2Q9H7U1 834 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 ARHGEF3Q9NR81 526 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 HEBP1Q9NRV9 189 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 RBM12Q9NTZ6 932 aaKnown RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 DNAAF2Q9NVR5 837 aaKnown RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 GTSE1Q9NYZ3 720 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 CLIC5Q9NZA1 410 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 NUDT5Q9UKK9 219 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.03□□□□□ -1.44
CUX1-208ENST00000485792 LRRK1Q38SD2 2015 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 ATP8B3O60423 1300 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 PROB1E7EW31 1015 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 TRDMT1O14717 391 aaKnown RBP6.02□□□□□ -1.45
CUX1-208ENST00000485792 XPO1O14980 1071 aaKnown RBP6.02□□□□□ -1.45
CUX1-208ENST00000485792 AP5Z1O43299 807 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 COCHO43405 550 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 PAPSS2O95340 614 aaPredicted RBP6.02□□□□□ -1.45
CUX1-208ENST00000485792 USP17L7P0C7H9 530 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 FAM200BP0CF97 657 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 CHRNB1P11230 501 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 HDCP19113 662 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 ANXA13P27216 316 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 GPD2P43304 727 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 MAGEA9P43362 315 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 PDE6CP51160 858 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 MAP3K7CLP57077 242 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 YWHAEP62258 255 aaKnown RBP6.02□□□□□ -1.45
CUX1-208ENST00000485792 DMWDQ09019 674 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 CCINQ13939 588 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 IQCB1Q15051 598 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 STILQ15468 1287 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 KLHL40Q2TBA0 621 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 CCDC40Q4G0X9 1142 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 RAB6CQ53S08 254 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 CCDC183Q5T5S1 534 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 RNF43Q68DV7 783 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 C1orf228Q6PIY5 440 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 HTR3DQ70Z44 454 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 BEND5Q7L4P6 421 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 RRAGAQ7L523 313 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 ENOSF1Q7L5Y1 443 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 TMEM110Q86TL2 294 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 RALGPS2Q86X27 583 aaPredicted RBP6.02□□□□□ -1.45
CUX1-208ENST00000485792 SCN4BQ8IWT1 228 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 FAM71AQ8IYT1 594 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 CCDC150Q8NCX0 1101 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 TTC8Q8TAM2 541 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 FAM200AQ8TCP9 573 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 STK32AQ8WU08 396 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 OSCP1Q8WVF1 389 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 MRPS31Q92665 395 aaKnown RBP6.02□□□□□ -1.45
CUX1-208ENST00000485792 SHDQ96IW2 340 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 HSFY1Q96LI6 401 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 FAM81BQ96LP2 452 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 TUBGCP2Q9BSJ2 902 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 RAB6CQ9H0N0 254 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 NDST4Q9H3R1 872 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 C8orf33Q9H7E9 229 aaPredicted RBP6.02□□□□□ -1.45
CUX1-208ENST00000485792 TBC1D17Q9HA65 648 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 LTB4R2Q9NPC1 389 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 PLCB1Q9NQ66 1216 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 ANLNQ9NQW6 1124 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 FAM86C1Q9NVL1 165 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
CUX1-208ENST00000485792 TAB2Q9NYJ8 693 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 TRPM5Q9NZQ8 1165 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 APEX2Q9UBZ4 518 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 LIMA1Q9UHB6 759 aaKnown RBP6.02□□□□□ -1.45
CUX1-208ENST00000485792 CHORDC1Q9UHD1 332 aaPredicted RBP6.02□□□□□ -1.45
CUX1-208ENST00000485792 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.02□□□□□ -1.45
CUX1-208ENST00000485792 SIK3Q9Y2K2 1263 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 FHOD1Q9Y613 1164 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 WNT6Q9Y6F9 365 aa6.02□□□□□ -1.45
CUX1-208ENST00000485792 ADAMTS9Q9P2N4 1935 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 CABIN1Q9Y6J0 2220 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 TRAV19A0A0A6YYK7 116 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 E2F8A0AVK6 867 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 KCNJ18B7U540 433 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 GOLGA6L22H0YM25 854 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 FOXN3O00409 490 aaPredicted RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 PIK3R2O00459 728 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 MAN2B1O00754 1011 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ZNF263O14978 683 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 SPINT1O43278 529 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 DKK1O94907 266 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 KLKB1P03952 638 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 DCNP07585 359 aaKnown RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 SETSIPP0DME0 302 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 TFE3P19532 575 aaPredicted RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 GDI1P31150 447 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 CDH5P33151 784 aaPredicted RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 AVPR1AP37288 418 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 OPRD1P41143 372 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 SGSHP51688 502 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms