RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 NUP210Q8TEM1 1887 aaPredicted RBP16.52■□□□□ 0.23
APOE-205ENST00000485628 GRXCR2A6NFK2 248 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 LRCH4O75427 683 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 SDC4P31431 198 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 PCK1P35558 622 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 RING1Q06587 406 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 CCDC85BQ15834 202 aaPredicted RBP16.51■□□□□ 0.23
APOE-205ENST00000485628 CES5AQ6NT32 575 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 TADA2BQ86TJ2 420 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 CPNE8Q86YQ8 564 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 NPAS3Q8IXF0 933 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 ARL14EPQ8N8R7 260 aaPredicted RBP16.51■□□□□ 0.23
APOE-205ENST00000485628 CD101Q93033 1021 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 RIPOR3Q96MK2 946 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 CYP2S1Q96SQ9 504 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 TRPV4Q9HBA0 871 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 LZTFL1Q9NQ48 299 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 TRMT1Q9NXH9 659 aaKnown RBP16.51■□□□□ 0.23
APOE-205ENST00000485628 SFMBT1Q9UHJ3 866 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 STAP1Q9ULZ2 295 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 GUCA1BQ9UMX6 200 aa16.51■□□□□ 0.23
APOE-205ENST00000485628 MRPS23Q9Y3D9 190 aaKnown RBP16.51■□□□□ 0.23
APOE-205ENST00000485628 GOLGA6L9A6NEM1 432 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 KCNU1A8MYU2 1149 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 I6L893 689 aaPredicted RBP16.5■□□□□ 0.23
APOE-205ENST00000485628 CAPN9O14815 690 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 MDM4O15151 490 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 BUB1O43683 1085 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 MOCS3O95396 460 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 F9P00740 461 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 HDCP19113 662 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 FSHRP23945 695 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 SLC1A1P43005 524 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 TRIP4Q15650 581 aaPredicted RBP16.5■□□□□ 0.23
APOE-205ENST00000485628 LEXMQ3ZCV2 418 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 C10orf120Q5SQS8 335 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 GPR158Q5T848 1215 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 CMTM8Q8IZV2 173 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 MAB21L3Q8N8X9 362 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 UBE2Q2Q8WVN8 375 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 FGF13Q92913 245 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 HLA-CQ95604 372 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 TRIM44Q96DX7 344 aaPredicted RBP16.5■□□□□ 0.23
APOE-205ENST00000485628 FCRL2Q96LA5 508 aaPredicted RBP16.5■□□□□ 0.23
APOE-205ENST00000485628 NECTIN4Q96NY8 510 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 IRX2Q9BZI1 471 aaPredicted RBP16.5■□□□□ 0.23
APOE-205ENST00000485628 POMKQ9H5K3 350 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 ANLNQ9NQW6 1124 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 PIGVQ9NUD9 493 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 GDE1Q9NZC3 331 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 MARCH2Q9P0N8 246 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 ARHGAP26Q9UNA1 814 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 TLR6Q9Y2C9 796 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 HBS1LQ9Y450 684 aaKnown RBP16.5■□□□□ 0.23
APOE-205ENST00000485628 USP15Q9Y4E8 981 aaPredicted RBP16.5■□□□□ 0.23
APOE-205ENST00000485628 ALG6Q9Y672 507 aa16.5■□□□□ 0.23
APOE-205ENST00000485628 MACROD2A1Z1Q3 448 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 M0QYT0 321 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 MBTPS2O43462 519 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 PSMA2P25787 234 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 NOP2P46087 812 aaKnown RBP16.49■□□□□ 0.23
APOE-205ENST00000485628 ATXN1P54253 815 aaKnown RBP16.49■□□□□ 0.23
APOE-205ENST00000485628 SLC25A11Q02978 314 aaKnown RBP16.49■□□□□ 0.23
APOE-205ENST00000485628 SMAD4Q13485 552 aaKnown RBP16.49■□□□□ 0.23
APOE-205ENST00000485628 PPP2R5DQ14738 602 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 ARHGAP29Q52LW3 1261 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 ARHGAP15Q53QZ3 475 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 NT5DC3Q86UY8 548 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 KIAA1958Q8N8K9 716 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 RNF139Q8WU17 664 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 FAM172AQ8WUF8 416 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 SERPINB11Q96P15 392 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 GCNAQ96QF7 691 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 NCAPGQ9BPX3 1015 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 ARHGEF38Q9NXL2 777 aa16.49■□□□□ 0.23
APOE-205ENST00000485628 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.49■□□□□ 0.237e-6■■■■□ 21.3
APOE-205ENST00000485628 KIF26AQ9ULI4 1882 aaPredicted RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 TRAV19A0A0A6YYK7 116 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 H3BQ06 376 aaPredicted RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 TCF4P15884 667 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 IL1R2P27930 398 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 MIPP30301 263 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 RDXP35241 583 aaKnown RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 SULT1E1P49888 294 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 KPNA1P52294 538 aaPredicted RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 COG7P83436 770 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 ATP11AP98196 1134 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 SCAPQ12770 1279 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 EFEMP1Q12805 493 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 MESDQ14696 234 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 CBX2Q14781 532 aaPredicted RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 IFI16Q16666 785 aaKnown RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 RSRC2Q7L4I2 434 aaKnown RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 C17orf53Q8N3J3 647 aaPredicted RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 ADAM32Q8TC27 787 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 USP13Q92995 863 aaPredicted RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 WBP2Q969T9 261 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 AZIN2Q96A70 460 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms