RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 PROB1E7EW31 1015 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 LEFTY2O00292 366 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 MAN2B1O00754 1011 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 PAPSS1O43252 624 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 MFAP3LO75121 409 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 NFATC1O95644 943 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 LATS1O95835 1130 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 ADH1CP00326 375 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 APOEP02649 317 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 CYBBP04839 570 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 SKILP12757 684 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 UNGP13051 313 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 CHRNB2P17787 502 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 GDI1P31150 447 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 CYLC1P35663 651 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 CHKAP35790 457 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 NBL1P41271 181 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 MATKP42679 507 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 ADKP55263 362 aaKnown RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 RNASE9P60153 205 aaKnown RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 FOXK2Q01167 660 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 RING1Q06587 406 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 FCHO2Q0JRZ9 810 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 TBX2Q13207 712 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 NNTQ13423 1086 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 ARID5BQ14865 1188 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 MTF1Q14872 753 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 E2F5Q15329 346 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 DCAF6Q58WW2 860 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 STXBP5Q5T5C0 1151 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 CWF19L1Q69YN2 538 aaKnown RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 MSANTD2Q6P1R3 559 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 DNAJC24Q6P3W2 148 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 MMS22LQ6ZRQ5 1243 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 ZNF571Q7Z3V5 609 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 CCDC117Q8IWD4 279 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 CCDC170Q8IYT3 715 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 CPA6Q8N4T0 437 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 ZNF557Q8N988 423 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 SLC30A5Q8TAD4 765 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 EDEM1Q92611 657 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 FGF14Q92915 247 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 NKD2Q969F2 451 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 NELL2Q99435 816 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 KXD1Q9BQD3 176 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 RNF38Q9H0F5 515 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 C8orf33Q9H7E9 229 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-208ENST00000485618 FAM204AQ9H8W3 233 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 GRPEL1Q9HAV7 217 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 NMUR1Q9HB89 426 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 GKN1Q9NS71 199 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 SMPD4Q9NXE4 827 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 CFAP97Q9P2B7 532 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 WNT16Q9UBV4 365 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 DUSP12Q9UNI6 340 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 TLR6Q9Y2C9 796 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 TRIOO75962 3097 aa8.63□□□□□ -1.03
SF3A1-208ENST00000485618 TYW5A2RUC4 315 aaKnown RBP8.62□□□□□ -1.03
SF3A1-208ENST00000485618 SIGLEC16A6NMB1 481 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 TMCO5BA8MYB1 307 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 GOLGA8SH3BPF8 625 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 STK25O00506 426 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 NCAM2O15394 837 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 TADA3O75528 432 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 TBX18O95935 607 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 ERBB2P04626 1255 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 CFHP08603 1231 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 PDGFRAP16234 1089 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 ABCB4P21439 1286 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 SDC4P31431 198 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 CCR1P32246 355 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 EIF4A3P38919 411 aaKnown RBP8.62□□□□□ -1.03
SF3A1-208ENST00000485618 GSCP56915 257 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-208ENST00000485618 TBX4P57082 545 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 GPC5P78333 572 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 PRKCQQ04759 706 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 MAPK8IP2Q13387 824 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-208ENST00000485618 TRIP4Q15650 581 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-208ENST00000485618 SLC18A3Q16572 532 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 ITPRIPL2Q3MIP1 535 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 ARL13BQ3SXY8 428 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 SLC25A52Q3SY17 297 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 PTPN20Q4JDL3 420 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 CCDC122Q5T0U0 273 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 ALKBH5Q6P6C2 394 aaKnown RBP8.62□□□□□ -1.03
SF3A1-208ENST00000485618 OLFML1Q6UWY5 402 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 VITQ6UXI7 678 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 FAM183BPQ6ZVS7 135 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 HTR3DQ70Z44 454 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 XYLT1Q86Y38 959 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 MCOLN2Q8IZK6 566 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 ATP6V0D2Q8N8Y2 350 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 C3orf20Q8ND61 904 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 FEZF2Q8TBJ5 459 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 OSCP1Q8WVF1 389 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 CTNNBL1Q8WYA6 563 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-208ENST00000485618 AZIN2Q96A70 460 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 CALR3Q96L12 384 aaKnown RBP8.62□□□□□ -1.03
SF3A1-208ENST00000485618 SLC2A13Q96QE2 648 aa8.62□□□□□ -1.03
SF3A1-208ENST00000485618 C11orf70Q9BRQ4 267 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms