RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	TAF4B	Q92750	862 aa		11.17	□□□□□ -0.62
HMGN1-215	ENST00000485550	LRIG1	Q96JA1	1093 aa		11.17	□□□□□ -0.62
HMGN1-215	ENST00000485550	APOBEC3G	Q9HC16	384 aa	Known RBP	11.17	□□□□□ -0.62
HMGN1-215	ENST00000485550	ARHGEF4	Q9NR80	690 aa		11.17	□□□□□ -0.62
HMGN1-215	ENST00000485550	IL37	Q9NZH6	218 aa		11.17	□□□□□ -0.62
HMGN1-215	ENST00000485550	TBC1D14	Q9P2M4	693 aa		11.17	□□□□□ -0.62
HMGN1-215	ENST00000485550	NUDT5	Q9UKK9	219 aa		11.17	□□□□□ -0.62
HMGN1-215	ENST00000485550	SLC6A14	Q9UN76	642 aa		11.17	□□□□□ -0.62
HMGN1-215	ENST00000485550	RAX	Q9Y2V3	346 aa		11.17	□□□□□ -0.62
HMGN1-215	ENST00000485550	TRIM24	O15164	1050 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	SH3BP5	O60239	455 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	TLR5	O60602	858 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	ZNF202	O95125	648 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	KAT7	O95251	611 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	ADH1C	P00326	375 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	APOD	P05090	189 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	ZDHHC11B	P0C7U3	371 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	KRT13	P13646	458 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	ACO1	P21399	889 aa	Known RBP	11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	GAD2	Q05329	585 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	DUOXA1	Q1HG43	343 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	ANO4	Q32M45	955 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	MAP7D1	Q3KQU3	841 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	ZNF394	Q53GI3	561 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	SNX30	Q5VWJ9	437 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	UNC93A	Q86WB7	457 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	TMEM25	Q86YD3	366 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	FAM186B	Q8IYM0	893 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	IL17RC	Q8NAC3	791 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	TMEM174	Q8WUU8	243 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	CYFIP2	Q96F07	1278 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	IMPG2	Q9BZV3	1241 aa		11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	TP53BP1	Q12888	1972 aa	Predicted RBP	11.16	□□□□□ -0.62
HMGN1-215	ENST00000485550	FAM237A	A0A1B0GTK4	181 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	TCRBV21S2A2	A0A5A6	115 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	FAM92A	A1XBS5	289 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	TBC1D3B	A6NDS4	549 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	MDM4	O15151	490 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	CYP26A1	O43174	497 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	FTH1P19	P0C7X4	201 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	FAM200B	P0CF97	657 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	PSMC2	P35998	433 aa	Known RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	GRIA2	P42262	883 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	MRPS21	P82921	87 aa	Known RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	FOXK1	P85037	733 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	TRIP6	Q15654	476 aa	Known RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	BTBD8	Q5XKL5	378 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	CLEC20A	Q6ZU45	233 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	INTS8	Q75QN2	995 aa	Known RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	GUF1	Q8N442	669 aa	Known RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	CEP76	Q8TAP6	659 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	ADAM32	Q8TC27	787 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	ADAMTS14	Q8WXS8	1223 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	ERLEC1	Q96DZ1	483 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	HNRNPAB	Q99729	332 aa	Known RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	NT5C1A	Q9BXI3	368 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	FBXO44	Q9H4M3	255 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	NMUR1	Q9HB89	426 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	CAPN10	Q9HC96	672 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	CSNK1G1	Q9HCP0	422 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	POLM	Q9NP87	494 aa	Predicted RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	TLR8	Q9NR97	1041 aa	Known RBP	11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	SPHK2	Q9NRA0	654 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	COMMD8	Q9NX08	183 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	OSER1	Q9NX31	292 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	PCDHB9	Q9Y5E1	797 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550	NAV2	Q8IVL1	2488 aa		11.15	□□□□□ -0.62
HMGN1-215	ENST00000485550		A0A1W2PQ27	194 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550		A0A1W2PQ64	194 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550		A0A1W2PQD8	194 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550		A0A1W2PQH9	124 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	HHLA1	C9JL84	531 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	ARHGAP33	O14559	1287 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	MAPK13	O15264	365 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	AP5Z1	O43299	807 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	TULP3	O75386	442 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	PRB1	P04280	392 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	SERPINF2	P08697	491 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	RARG	P13631	454 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	TRIM21	P19474	475 aa	Known RBP	11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	RPL13	P26373	211 aa	Known RBP	11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	ATP5C1	P36542	298 aa	Known RBP	11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	EIF2D	P41214	584 aa	Known RBP	11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	DPP6	P42658	865 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	WAS	P42768	502 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	KIR2DL1	P43626	348 aa	Predicted RBP	11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	RPL6	Q02878	288 aa	Known RBP	11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	PNOC	Q13519	176 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	NFIL3	Q16649	462 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	SPDYC	Q5MJ68	293 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	TPGS1	Q6ZTW0	290 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	KIAA1958	Q8N8K9	716 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	SEMA4D	Q92854	862 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	BHMT	Q93088	406 aa		11.14	□□□□□ -0.63
HMGN1-215	ENST00000485550	OTUB2	Q96DC9	234 aa		11.14	□□□□□ -0.63

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