RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ZBTB24O43167 697 aaPredicted RBP20.21■□□□□ 0.83
COL27A1-205ENST00000485397 HMBSP08397 361 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 DPP6P42658 865 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 MCCD1P59942 119 aaPredicted RBP20.21■□□□□ 0.83
COL27A1-205ENST00000485397 ZNF33AQ06730 810 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 EFEMP1Q12805 493 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 TADA2BQ86TJ2 420 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 SLC41A1Q8IVJ1 513 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 ZNF276Q8N554 614 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 SLC4A11Q8NBS3 891 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 TATDN2Q93075 761 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 TMEM176AQ96HP8 235 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 ARID3AQ99856 593 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 DNAI2Q9GZS0 605 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 CISHQ9NSE2 258 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 SLC6A14Q9UN76 642 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 WASF3Q9UPY6 502 aa20.21■□□□□ 0.83
COL27A1-205ENST00000485397 PI4KAP42356 2102 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 ZNF217O75362 1048 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 MXI1P50539 228 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 RAD23BP54727 409 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 DUOXA1Q1HG43 343 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 EDRF1Q3B7T1 1238 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 FYB2Q5VWT5 728 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 PIGZQ86VD9 579 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 FBXL13Q8NEE6 735 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 GTPBP2Q9BX10 602 aaKnown RBP20.2■□□□□ 0.82
COL27A1-205ENST00000485397 GDPD2Q9HCC8 539 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 RAB20Q9NX57 234 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 ZNF510Q9Y2H8 683 aa20.2■□□□□ 0.82
COL27A1-205ENST00000485397 USP24Q9UPU5 2620 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 C1QTNF9BB2RNN3 333 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 PENKP01210 267 aaPredicted RBP20.19■□□□□ 0.82
COL27A1-205ENST00000485397 C1QTNF9P0C862 333 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 CORO1AP31146 461 aaKnown RBP20.19■□□□□ 0.82
COL27A1-205ENST00000485397 HOXD12P35452 270 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 MFAP3P55082 362 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 COG7P83436 770 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 ARHGAP17Q68EM7 881 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 TRIML1Q8N9V2 468 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 CEP76Q8TAP6 659 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 MRGPRX1Q96LB2 322 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 CDK5RAP1Q96SZ6 601 aaKnown RBP20.19■□□□□ 0.82
COL27A1-205ENST00000485397 SCAND2PQ9GZW5 306 aaPredicted RBP20.19■□□□□ 0.82
COL27A1-205ENST00000485397 STON1Q9Y6Q2 735 aa20.19■□□□□ 0.82
COL27A1-205ENST00000485397 GFRA2O00451 464 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 CETN3O15182 167 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 PROS1P07225 676 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 SERPINF2P08697 491 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 EPB41P11171 864 aaKnown RBP20.18■□□□□ 0.82
COL27A1-205ENST00000485397 ATXN3P54252 364 aaPredicted RBP20.18■□□□□ 0.82
COL27A1-205ENST00000485397 GFPT1Q06210 699 aaPredicted RBP20.18■□□□□ 0.82
COL27A1-205ENST00000485397 GEN1Q17RS7 908 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 RAB41Q5JT25 222 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 KIAA1324Q6UXG2 1013 aaKnown RBP20.18■□□□□ 0.82
COL27A1-205ENST00000485397 DENND1CQ8IV53 801 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 OR2I1PQ8NGU4 316 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 NDRG1Q92597 394 aaKnown RBP20.18■□□□□ 0.82
COL27A1-205ENST00000485397 FAXDC2Q96IV6 333 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 HSPA12BQ96MM6 686 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 UBXN6Q9BZV1 441 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 CAPN10Q9HC96 672 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 AGO1Q9UL18 857 aaKnown RBP20.18■□□□□ 0.82
COL27A1-205ENST00000485397 CLEC4EQ9ULY5 219 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 SLC27A6Q9Y2P4 619 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 LAMA1P25391 3075 aa20.18■□□□□ 0.82
COL27A1-205ENST00000485397 CEP192Q8TEP8 1941 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 SLC12A8A0AV02 714 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 TULP2O00295 520 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 CHKAP35790 457 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 IL12RB1P42701 662 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 YWHAGP61981 247 aaKnown RBP eCLIP20.17■□□□□ 0.82
COL27A1-205ENST00000485397 SEMA3BQ13214 749 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 PNOCQ13519 176 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 CBWD6Q4V339 395 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 CBWD3Q5JTY5 395 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 CBWD5Q5RIA9 395 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 RSRC2Q7L4I2 434 aaKnown RBP20.17■□□□□ 0.82
COL27A1-205ENST00000485397 PIP4P1Q86T03 277 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 TTC39CQ8N584 583 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 ANKRD52Q8NB46 1076 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 DCLK3Q9C098 648 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 SLC32A1Q9H598 525 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 MARCH2Q9P0N8 246 aa20.17■□□□□ 0.82
COL27A1-205ENST00000485397 ADAMTS9Q9P2N4 1935 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 STX10O60499 249 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 PRCPP42785 496 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 TKTL1P51854 596 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 FUT11Q495W5 492 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 TCERG1LQ5VWI1 586 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 UNQ6494/PRO21346Q6UXR6 183 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 RGL4Q8IZJ4 473 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 ARHGAP18Q8N392 663 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 HDDC3Q8N4P3 179 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 ZNF419Q96HQ0 510 aaPredicted RBP20.16■□□□□ 0.82
COL27A1-205ENST00000485397 SCNM1Q9BWG6 230 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 ULBP1Q9BZM6 244 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 THAP10Q9P2Z0 257 aaPredicted RBP20.16■□□□□ 0.82
COL27A1-205ENST00000485397 STRIP2Q9ULQ0 834 aa20.16■□□□□ 0.82
COL27A1-205ENST00000485397 ATP6V1DQ9Y5K8 247 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms