RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 SLC6A3Q01959 620 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 CENPCQ03188 943 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 EIF4EBP2Q13542 120 aaPredicted RBP16.99■□□□□ 0.31
COL2A1-206ENST00000483376 DHCR24Q15392 516 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 PPP1R2P3Q6NXS1 205 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 FAM183BPQ6ZVS7 135 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 ERICH1Q86X53 443 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 BBS7Q8IWZ6 715 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 CCDC105Q8IYK2 499 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 WBP2Q969T9 261 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 AZIN2Q96A70 460 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 FAM149B1Q96BN6 582 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 C18orf8Q96DM3 657 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 PIWIL1Q96J94 861 aaKnown RBP16.99■□□□□ 0.31
COL2A1-206ENST00000483376 SERPINB11Q96P15 392 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 PRRX2Q99811 253 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 IRX2Q9BZI1 471 aaPredicted RBP16.99■□□□□ 0.31
COL2A1-206ENST00000483376 SYNCQ9H7C4 482 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 RRN3Q9NYV6 651 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 MARK1Q9P0L2 795 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 CAPN11Q9UMQ6 739 aa16.99■□□□□ 0.31
COL2A1-206ENST00000483376 COL4A3Q01955 1670 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 SLC12A8A0AV02 714 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 KLKB1P03952 638 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 NCAM1P13591 858 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 TARSP26639 723 aaKnown RBP16.98■□□□□ 0.31
COL2A1-206ENST00000483376 CHKAP35790 457 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 ZBED6P86452 979 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 FZD5Q13467 585 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 TRIM14Q14142 442 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 GAB4Q2WGN9 574 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 TMEM196Q5HYL7 178 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 SFMBT2Q5VUG0 894 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 NUGGCQ68CJ6 796 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 RHBDF2Q6PJF5 856 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 TXNDC11Q6PKC3 985 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 MAMSTRQ6ZN01 415 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 XYLT1Q86Y38 959 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 PHF13Q86YI8 300 aaPredicted RBP16.98■□□□□ 0.31
COL2A1-206ENST00000483376 SYNPOQ8N3V7 929 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 CPXM2Q8N436 756 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 TMEM105Q8N8V8 129 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 RNF214Q8ND24 703 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 DQX1Q8TE96 717 aaKnown RBP16.98■□□□□ 0.31
COL2A1-206ENST00000483376 AGPAT1Q99943 283 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 FOXQ1Q9C009 403 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 TLR6Q9Y2C9 796 aa16.98■□□□□ 0.31
COL2A1-206ENST00000483376 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.98■□□□□ 0.31
COL2A1-206ENST00000483376 FAM170BA6NMN3 283 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 CAPN9O14815 690 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 DAB1O75553 588 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 IRF1P10914 325 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 CORO1AP31146 461 aaKnown RBP16.97■□□□□ 0.31
COL2A1-206ENST00000483376 SOX9P48436 509 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 HARS2P49590 506 aaKnown RBP16.97■□□□□ 0.31
COL2A1-206ENST00000483376 VCPP55072 806 aaKnown RBP16.97■□□□□ 0.31
COL2A1-206ENST00000483376 ASIC2Q16515 512 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 CLEC16AQ2KHT3 1053 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 DGKKQ5KSL6 1271 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 NAA35Q5VZE5 725 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 OR6B2Q6IFH4 312 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 UNC45BQ8IWX7 931 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 OLIG1Q8TAK6 271 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 SLC39A13Q96H72 371 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 PCDHB18PQ96TA0 734 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 ANP32EQ9BTT0 268 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 SPHK2Q9NRA0 654 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 WDR35Q9P2L0 1181 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 SFMBT1Q9UHJ3 866 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 NAALADL1Q9UQQ1 740 aa16.97■□□□□ 0.31
COL2A1-206ENST00000483376 ARIH1Q9Y4X5 557 aaPredicted RBP16.97■□□□□ 0.31
COL2A1-206ENST00000483376 BZW2Q9Y6E2 419 aaKnown RBP16.97■□□□□ 0.31
COL2A1-206ENST00000483376 GFRA2O00451 464 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 IRAK2O43187 625 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 PI15O43692 258 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 GYPCP04921 128 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 CHRNB1P11230 501 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 ADH5P11766 374 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 DRD1P21728 446 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 CD72P21854 359 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 NOS2P35228 1153 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 ARID5AQ03989 594 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 GAD2Q05329 585 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 PTP4A2Q12974 167 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 MTA1Q13330 715 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 CCINQ13939 588 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 LRRC32Q14392 662 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 ARID5BQ14865 1188 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 UBXN2BQ14CS0 331 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 SYPL2Q5VXT5 272 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 E4F1Q66K89 784 aaPredicted RBP16.96■□□□□ 0.31
COL2A1-206ENST00000483376 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 ETFBKMTQ8IXQ9 262 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 TTC16Q8NEE8 873 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 CPA5Q8WXQ8 436 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 NT5C3BQ969T7 300 aa16.96■□□□□ 0.31
COL2A1-206ENST00000483376 PGAP3Q96FM1 320 aaPredicted RBP16.96■□□□□ 0.31
COL2A1-206ENST00000483376 AGO1Q9UL18 857 aaKnown RBP16.96■□□□□ 0.31
COL2A1-206ENST00000483376 LUC7L2Q9Y383 392 aaKnown RBP16.96■□□□□ 0.31
COL2A1-206ENST00000483376 KMT2EQ8IZD2 1858 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms