RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MSANTD2Q6P1R3 559 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 ZNF276Q8N554 614 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 ELSPBP1Q96BH3 223 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 ZFYVE19Q96K21 471 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 ADAM33Q9BZ11 813 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 KIF9Q9HAQ2 790 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 CD320Q9NPF0 282 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 ANKRD62A6NC57 917 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 SIGLEC16A6NMB1 481 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 TRUB2O95900 331 aaKnown RBP18.6■□□□□ 0.57
CPNE1-224ENST00000483359 NOS2P35228 1153 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 ATP11AP98196 1134 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 USP4Q13107 963 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 ZNF77Q15935 545 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 PLEKHA7Q6IQ23 1121 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 LRRC8AQ8IWT6 810 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 BPIFB1Q8TDL5 484 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 RXFP2Q8WXD0 754 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 CTNNBL1Q8WYA6 563 aaPredicted RBP18.6■□□□□ 0.57
CPNE1-224ENST00000483359 SERPINB11Q96P15 392 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 TRIM7Q9C029 511 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 DDIT4Q9NX09 232 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 CALCOCO1Q9P1Z2 691 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 STAP1Q9ULZ2 295 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 TFR2Q9UP52 801 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 SH3BP1Q9Y3L3 701 aa18.6■□□□□ 0.57
CPNE1-224ENST00000483359 EPN1Q9Y6I3 576 aaPredicted RBP18.6■□□□□ 0.57
CPNE1-224ENST00000483359 C19orf67A6NJJ6 358 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 M0QYT0 321 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 ECI2O75521 394 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 H2AFZP0C0S5 128 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 PDGFRAP16234 1089 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 WEE1P30291 646 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 GPC5P78333 572 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 SPA17Q15506 151 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 C15orf59Q2T9L4 293 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-224ENST00000483359 PPP1R15BQ5SWA1 713 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 OTUD1Q5VV17 481 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-224ENST00000483359 H2AFVQ71UI9 128 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 BEND5Q7L4P6 421 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 GJD3Q8N144 294 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 ACRBPQ8NEB7 543 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 PDLIM2Q96JY6 352 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 TBCBQ99426 244 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 DESI2Q9BSY9 194 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 SCINQ9Y6U3 715 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 C2CD4BA6NLJ0 364 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 SDC4P31431 198 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 COG7P83436 770 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 NUP85Q9BW27 656 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 IGSF9Q9P2J2 1179 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 WNT6Q9Y6F9 365 aa18.59■□□□□ 0.57
CPNE1-224ENST00000483359 EIF3CLB5ME19 914 aaKnown RBP18.58■□□□□ 0.56
CPNE1-224ENST00000483359 IRAK2O43187 625 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 STC2O76061 302 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 IPO7O95373 1038 aaKnown RBP18.58■□□□□ 0.56
CPNE1-224ENST00000483359 PSMC3P17980 439 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 GPD1P21695 349 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 MAGEA1P43355 309 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 ATXN1P54253 815 aaKnown RBP18.58■□□□□ 0.56
CPNE1-224ENST00000483359 TBX4P57082 545 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 RAB6CQ53S08 254 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 SH3PXD2AQ5TCZ1 1133 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 TRIM68Q6AZZ1 485 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 RNF135Q8IUD6 432 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 MFSD6LQ8IWD5 586 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 YAF2Q8IY57 180 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 UHRF1Q96T88 793 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-224ENST00000483359 NPY6RQ99463 290 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 EIF3CQ99613 913 aaKnown RBP18.58■□□□□ 0.56
CPNE1-224ENST00000483359 DDX23Q9BUQ8 820 aaKnown RBP18.58■□□□□ 0.56
CPNE1-224ENST00000483359 RAB6CQ9H0N0 254 aa18.58■□□□□ 0.56
CPNE1-224ENST00000483359 NARSO43776 548 aaKnown RBP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 LCA5LO95447 670 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 CORO1AP31146 461 aaKnown RBP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 GDI1P31150 447 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 OGDHQ02218 1023 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 SLC25A52Q3SY17 297 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 CCDC14Q49A88 953 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 CC2D1AQ6P1N0 951 aaPredicted RBP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 DDX42Q86XP3 938 aaKnown RBP eCLIP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 SLC44A3Q8N4M1 653 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 E2F7Q96AV8 911 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 ASIC4Q96FT7 647 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 MRPL47Q9HD33 250 aaKnown RBP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 OBP2AQ9NY56 170 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 CTTNBP2NLQ9P2B4 639 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 PCDHA13Q9Y5I0 950 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 MOCS2O96007 188 aaPredicted RBP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 IGLV3-25P01717 112 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 CYP1A2P05177 515 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 TMEM253P0C7T8 217 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 TRIP4Q15650 581 aaPredicted RBP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 ARCQ7LC44 396 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 DENND1CQ8IV53 801 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 CCDC112Q8NEF3 446 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 DEPDC1BQ8WUY9 529 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 RNF34Q969K3 372 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 BTBD6Q96KE9 485 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 TRMT61BQ9BVS5 477 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms