RNA–Protein interactions for RNA: ENST00000482976.1

NCBP2-213, Transcript of nuclear cap binding protein subunit 2, human

TSL 2

Gene NCBP2, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCBP2-213	ENST00000482976	RPL34	P49207	117 aa	Known RBP	13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	POLR2F	P61218	127 aa	Known RBP	13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	SYCP1	Q15431	976 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	TAF5	Q15542	800 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	C2orf27A	Q580R0	203 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	FKBP15	Q5T1M5	1219 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	TAF3	Q5VWG9	929 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	ASCL5	Q7RTU5	278 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	APTX	Q7Z2E3	356 aa	Known RBP	13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	DHX40	Q8IX18	779 aa	Known RBP	13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	SCML4	Q8N228	414 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	SYNPO	Q8N3V7	929 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	IRGQ	Q8WZA9	623 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	FAM149B1	Q96BN6	582 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	PIWIL1	Q96J94	861 aa	Known RBP	13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	PNKP	Q96T60	521 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	BBS2	Q9BXC9	721 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	GAN	Q9H2C0	597 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	NLRC4	Q9NPP4	1024 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	AGO1	Q9UL18	857 aa	Known RBP	13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	NAALADL1	Q9UQQ1	740 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	SDK1	Q7Z5N4	2213 aa		13.72	□□□□□ -0.21
NCBP2-213	ENST00000482976	CHURC1-FNTB	B4DL54	471 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976		K7ESF4	209 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	TULP3	O75386	442 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	FBXO21	O94952	628 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	KAT7	O95251	611 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	NCAM1	P13591	858 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	TYR	P14679	529 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	KRT9	P35527	623 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	FNTB	P49356	437 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	UBXN1	Q04323	297 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	PDCL	Q13371	301 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	KLHL40	Q2TBA0	621 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	ZNF528	Q3MIS6	628 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	SYPL2	Q5VXT5	272 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	MAMSTR	Q6ZN01	415 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	TMEM110	Q86TL2	294 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	ETFBKMT	Q8IXQ9	262 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	CCDC33	Q8N5R6	958 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	C1orf131	Q8NDD1	294 aa	Known RBP	13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	ADAM32	Q8TC27	787 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	CPXM1	Q96SM3	734 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	FUCA2	Q9BTY2	467 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	STK33	Q9BYT3	514 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	ARHGEF4	Q9NR80	690 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	OLA1	Q9NTK5	396 aa	Known RBP	13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	SIK3	Q9Y2K2	1263 aa		13.71	□□□□□ -0.21
NCBP2-213	ENST00000482976	EP300	Q09472	2414 aa	Predicted RBP	13.71	□□□□□ -0.22
NCBP2-213	ENST00000482976	GPR179	Q6PRD1	2367 aa		13.71	□□□□□ -0.22
NCBP2-213	ENST00000482976	LGALS16	A8MUM7	142 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	TEX33	O43247	280 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	HOXC11	O43248	304 aa	Predicted RBP	13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	TSPAN3	O60637	253 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	GFPT2	O94808	682 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	APOD	P05090	189 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	CYP11B1	P15538	503 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	TIE1	P35590	1138 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	ACADSB	P45954	432 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	ZNF165	P49910	485 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	SRSF5	Q13243	272 aa	Known RBP	13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	TRIP4	Q15650	581 aa	Predicted RBP	13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	TOGARAM2	Q6ZUX3	1019 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	NOP9	Q86U38	636 aa	Known RBP	13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	PHTF2	Q8N3S3	785 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	ANKRD20A12P	Q8NF67	263 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	STK32A	Q8WU08	396 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	ATRIP	Q8WXE1	791 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	GOLGA1	Q92805	767 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	NKD2	Q969F2	451 aa	Predicted RBP	13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	EXOC4	Q96A65	974 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	PPP1R13B	Q96KQ4	1090 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	IER2	Q9BTL4	223 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	NAT10	Q9H0A0	1025 aa	Known RBP	13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	PDCL3	Q9H2J4	239 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	DNAJC17	Q9NVM6	304 aa	Known RBP	13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	ZSCAN32	Q9NX65	697 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	DEC1	Q9P2X7	70 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	PCDHGC3	Q9UN70	934 aa		13.7	□□□□□ -0.22
NCBP2-213	ENST00000482976	FAM186A	A6NE01	2351 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	GOLGA6L7	A0A1B0GV03	622 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	TBC1D3B	A6NDS4	549 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	PRR23A	A6NEV1	266 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	LRRC10B	A6NIK2	292 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	PROB1	E7EW31	1015 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976		F8VZ95	297 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	GFRA3	O60609	400 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	GRAP2	O75791	330 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	ERBB2	P04626	1255 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	GRIA2	P42262	883 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	PITX1	P78337	314 aa	Predicted RBP	13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	MEA1	Q16626	185 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	FBXO43	Q4G163	708 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	C2CD6	Q53TS8	623 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	OR6B2	Q6IFH4	312 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	MSANTD2	Q6P1R3	559 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	ALLC	Q8N6M5	410 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	ZBTB44	Q8NCP5	570 aa		13.69	□□□□□ -0.22
NCBP2-213	ENST00000482976	DQX1	Q8TE96	717 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms