RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 VDRP11473 427 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 CD19P15391 556 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 DPP6P42658 865 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 BCAT1P54687 386 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 MAP7D1Q3KQU3 841 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 DAB2IPQ5VWQ8 1189 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 PM20D1Q6GTS8 502 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 TCEAL6Q6IPX3 200 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 BHLHA9Q7RTU4 235 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 TMEFF1Q8IYR6 380 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 UBR7Q8N806 425 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 TCEAL3Q969E4 200 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 CEP63Q96MT8 703 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 EDEM2Q9BV94 578 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 LSM14BQ9BX40 385 aaKnown RBP14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 OLA1Q9NTK5 396 aaKnown RBP14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 PLK2Q9NYY3 685 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 MARCH2Q9P0N8 246 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 TSPAN16Q9UKR8 245 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 THADAQ6YHU6 1953 aa14.1□□□□□ -0.15
CTDSP1-208ENST00000482272 SLC12A8A0AV02 714 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 PRRT4C9JH25 899 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 GFRA2O00451 464 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 AP5Z1O43299 807 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 ZNF217O75362 1048 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 KLKB1P03952 638 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 GABRG2P18507 467 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 WASP42768 502 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 FMO5P49326 533 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 PDE4CQ08493 712 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 BST2Q10589 180 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 LRMPQ12912 555 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 E2F5Q15329 346 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 GOLGA7BQ2TAP0 167 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 CCDC40Q4G0X9 1142 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 EGFLAMQ63HQ2 1017 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 SLC36A4Q6YBV0 504 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 FRMD1Q8N878 549 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 IPO4Q8TEX9 1081 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 NDRG1Q92597 394 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 BHMTQ93088 406 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 IPO9Q96P70 1041 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 FBXO10Q9UK96 956 aa14.09□□□□□ -0.15
CTDSP1-208ENST00000482272 PLXND1Q9Y4D7 1925 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 BICDL2A1A5D9 508 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 C4orf47A7E2U8 309 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 PPP1R3GB7ZBB8 358 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 PMM2O15305 246 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 GABBR2O75899 941 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 CALCAP01258 141 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 CORO1AP31146 461 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 IRX4P78413 519 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 LMAN2Q12907 356 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 TTI2Q6NXR4 508 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 TOGARAM2Q6ZUX3 1019 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 SYT12Q8IV01 421 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 DENND1CQ8IV53 801 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 UBA3Q8TBC4 463 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 RNF139Q8WU17 664 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 UCMAQ8WVF2 138 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 KCTD13Q8WZ19 329 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 KAT5Q92993 513 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 PLD4Q96BZ4 506 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 CNTNAP3BQ96NU0 1288 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 NT5C1BQ96P26 610 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 ACOX2Q99424 681 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 GABRG3Q99928 467 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 ZSWIM1Q9BR11 485 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 NUSAP1Q9BXS6 441 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 CNTNAP3Q9BZ76 1288 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 ULBP1Q9BZM6 244 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 MBD1Q9UIS9 605 aaPredicted RBP14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 AGO1Q9UL18 857 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 SLC27A6Q9Y2P4 619 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 LAMA1P25391 3075 aa14.08□□□□□ -0.16
CTDSP1-208ENST00000482272 A0A1W2PQF6 199 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 LNP1A1A4G5 178 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 PATE3B3GLJ2 98 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 NPC1O15118 1278 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 P4HA2O15460 535 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 KCNK5O95279 499 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 PENKP01210 267 aaPredicted RBP14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 PAEPP09466 180 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 SETSIPP0DME0 302 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 HARS2P49590 506 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 ZNF132P52740 706 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 TRIM61Q5EBN2 209 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 FYB2Q5VWT5 728 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 LYSMD4Q5XG99 296 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 KLHL10Q6JEL2 608 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 TMEM270Q6UE05 265 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 ARMCX6Q7L4S7 300 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 SIX6OS1Q8N1H7 587 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 CPXM2Q8N436 756 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 LMO3Q8TAP4 145 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 DDI1Q8WTU0 396 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 TMEM9BQ9NQ34 198 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 ABCC13Q9NSE7 274 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 CALCOCO1Q9P1Z2 691 aa14.07□□□□□ -0.16
CTDSP1-208ENST00000482272 EVLQ9UI08 416 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms