RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PRRT4C9JH25 899 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 E7ENQ6 273 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 LRP3O75074 770 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 ALDH1A2O94788 518 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 AFPP02771 609 aaKnown RBP10.97□□□□□ -0.65
CPSF4-212ENST00000482251 SETSIPP0DME0 302 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 KRT5P13647 590 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 HOXB2P14652 356 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 TNFRSF4P43489 277 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 DGKGP49619 791 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 ARHGAP8P85298 464 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 APBA1Q02410 837 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 CETN1Q12798 172 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 USP39Q53GS9 565 aaKnown RBP10.97□□□□□ -0.65
CPSF4-212ENST00000482251 ARMCX6Q7L4S7 300 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 FMNL3Q8IVF7 1028 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 ARHGAP18Q8N392 663 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 LMO3Q8TAP4 145 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 CLEC4CQ8WTT0 213 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 KREMEN1Q96MU8 473 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 XPO6Q96QU8 1125 aaKnown RBP10.97□□□□□ -0.65
CPSF4-212ENST00000482251 CDK5RAP1Q96SZ6 601 aaKnown RBP10.97□□□□□ -0.65
CPSF4-212ENST00000482251 CRACR2AQ9BSW2 395 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 FAM124BQ9H5Z6 455 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-212ENST00000482251 POLMQ9NP87 494 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-212ENST00000482251 CHMP5Q9NZZ3 219 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 SFMBT1Q9UHJ3 866 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 AGO1Q9UL18 857 aaKnown RBP10.97□□□□□ -0.65
CPSF4-212ENST00000482251 HCN2Q9UL51 889 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 STRIP2Q9ULQ0 834 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.97□□□□□ -0.65
CPSF4-212ENST00000482251 RAD54BQ9Y620 910 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 ATXN2Q99700 1313 aaKnown RBP10.97□□□□□ -0.65
CPSF4-212ENST00000482251 GNA14O95837 355 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 PAEPP09466 180 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 DHPSP49366 369 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-212ENST00000482251 COG7P83436 770 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 PKDCCQ504Y2 493 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 FYB2Q5VWT5 728 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 BSPRYQ5W0U4 402 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 PMS2CLQ68D20 193 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 PMF1Q6P1K2 205 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 GJB7Q6PEY0 223 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 CHPFQ8IZ52 775 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 NETO1Q8TDF5 533 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 RNF139Q8WU17 664 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 LOXL4Q96JB6 756 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 ZC3H10Q96K80 434 aaKnown RBP10.96□□□□□ -0.65
CPSF4-212ENST00000482251 SPACA7Q96KW9 195 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 UBXN6Q9BZV1 441 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 MIS12Q9H081 205 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 SLC6A17Q9H1V8 727 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 CACNA2D2Q9NY47 1150 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 MARK1Q9P0L2 795 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 KIAA1468Q9P260 1216 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 WDR35Q9P2L0 1181 aa10.96□□□□□ -0.65
CPSF4-212ENST00000482251 A0A0A0MRY4 1105 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 P4HA2O15460 535 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 TSPAN3O60637 253 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 GABBR2O75899 941 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 RHOBTB1O94844 696 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 GABRG2P18507 467 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 NTSR1P30989 418 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 MARSP56192 900 aaKnown RBP10.95□□□□□ -0.66
CPSF4-212ENST00000482251 DAOAP59103 153 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 GEN1Q17RS7 908 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 HSF5Q4G112 596 aaPredicted RBP10.95□□□□□ -0.66
CPSF4-212ENST00000482251 PREPLQ4J6C6 727 aaPredicted RBP10.95□□□□□ -0.66
CPSF4-212ENST00000482251 HSP90AA4PQ58FG1 418 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 PM20D1Q6GTS8 502 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 KIAA1211LQ6NV74 962 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 LCLAT1Q6UWP7 414 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 NUDT18Q6ZVK8 323 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 CYP2U1Q7Z449 544 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 TRMT11Q7Z4G4 463 aaKnown RBP10.95□□□□□ -0.66
CPSF4-212ENST00000482251 CACUL1Q86Y37 369 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 ABCA7Q8IZY2 2146 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 DEFB119Q8N690 84 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 TRIML1Q8N9V2 468 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 PLD4Q96BZ4 506 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 MED15Q96RN5 788 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 RTKNQ9BST9 563 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 ACP6Q9NPH0 428 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 CD93Q9NPY3 652 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 ST7Q9NRC1 585 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 CALCOCO1Q9P1Z2 691 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 RWDD2AQ9UIY3 292 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 CLEC4EQ9ULY5 219 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 MYO18AQ92614 2054 aaKnown RBP10.95□□□□□ -0.66
CPSF4-212ENST00000482251 THADAQ6YHU6 1953 aa10.95□□□□□ -0.66
CPSF4-212ENST00000482251 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 A0A1W2PQF6 199 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 PATE3B3GLJ2 98 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 WASH3PC4AMC7 463 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 SLC30A4O14863 429 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 PMM2O15305 246 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 CAVIN2O95810 425 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 PENKP01210 267 aaPredicted RBP10.94□□□□□ -0.66
CPSF4-212ENST00000482251 ZNF806P0C7X5 589 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms