RNA–Protein interactions for RNA: ENST00000481573.1

SEC61B-202, Transcript of Sec61 translocon beta subunit, humanhuman

TSL 2

Gene SEC61B, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-202ENST00000481573 RIN3Q8TB24 985 aa13.78□□□□□ -0.2
SEC61B-202ENST00000481573 GOLGA1Q92805 767 aa13.78□□□□□ -0.2
SEC61B-202ENST00000481573 NECTIN4Q96NY8 510 aa13.78□□□□□ -0.2
SEC61B-202ENST00000481573 TBCBQ99426 244 aa13.78□□□□□ -0.2
SEC61B-202ENST00000481573 SMG9Q9H0W8 520 aaKnown RBP13.78□□□□□ -0.2
SEC61B-202ENST00000481573 MRPL47Q9HD33 250 aaKnown RBP13.78□□□□□ -0.2
SEC61B-202ENST00000481573 LUC7LQ9NQ29 371 aaKnown RBP13.78□□□□□ -0.2
SEC61B-202ENST00000481573 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
SEC61B-202ENST00000481573 A0A0A6YYK5 440 aaPredicted RBP13.77□□□□□ -0.21
SEC61B-202ENST00000481573 TRAV19A0A0A6YYK7 116 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 SOBPA7XYQ1 873 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 CAPN9O14815 690 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 PRAMEF12O95522 483 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 TRUB2O95900 331 aaKnown RBP13.77□□□□□ -0.21
SEC61B-202ENST00000481573 PDGFRAP16234 1089 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 HDCP19113 662 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 ATP5C1P36542 298 aaKnown RBP13.77□□□□□ -0.21
SEC61B-202ENST00000481573 PTPN9P43378 593 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 ZNF143P52747 638 aaPredicted RBP13.77□□□□□ -0.21
SEC61B-202ENST00000481573 ATXN1P54253 815 aaKnown RBP13.77□□□□□ -0.21
SEC61B-202ENST00000481573 HADHBP55084 474 aaKnown RBP13.77□□□□□ -0.21
SEC61B-202ENST00000481573 SLC7A9P82251 487 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 SLC25A52Q3SY17 297 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 ARHGAP15Q53QZ3 475 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 REXO1L1PQ8IX06 675 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 RHOT2Q8IXI1 618 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 ARFGAP1Q8N6T3 406 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 ADAMTS19Q8TE59 1207 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 FNIP1Q8TF40 1166 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 RNF139Q8WU17 664 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 CENPIQ92674 756 aaPredicted RBP13.77□□□□□ -0.21
SEC61B-202ENST00000481573 WBP2Q969T9 261 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 TRIM62Q9BVG3 475 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 KLF16Q9BXK1 252 aaPredicted RBP13.77□□□□□ -0.21
SEC61B-202ENST00000481573 OLA1Q9NTK5 396 aaKnown RBP13.77□□□□□ -0.21
SEC61B-202ENST00000481573 MARCH2Q9P0N8 246 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 RASAL2Q9UJF2 1139 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 ANAPC7Q9UJX3 599 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 CCL26Q9Y258 94 aa13.77□□□□□ -0.21
SEC61B-202ENST00000481573 USP27XA6NNY8 438 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 IRAK2O43187 625 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 ENDOD1O94919 500 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
SEC61B-202ENST00000481573 PFKLP17858 780 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 FCARP24071 287 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 SDC4P31431 198 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 SULT1E1P49888 294 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 ATP11AP98196 1134 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 SMAD2Q15796 467 aaKnown RBP13.76□□□□□ -0.21
SEC61B-202ENST00000481573 CDO1Q16878 200 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 DAB2IPQ5VWQ8 1189 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 ZNF662Q6ZS27 426 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 MIB1Q86YT6 1006 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 CMTM8Q8IZV2 173 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 ZSCAN18Q8TBC5 510 aaPredicted RBP13.76□□□□□ -0.21
SEC61B-202ENST00000481573 USP13Q92995 863 aaPredicted RBP13.76□□□□□ -0.21
SEC61B-202ENST00000481573 RSPRY1Q96DX4 576 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 PGAP3Q96FM1 320 aaPredicted RBP13.76□□□□□ -0.21
SEC61B-202ENST00000481573 FCRL2Q96LA5 508 aaPredicted RBP13.76□□□□□ -0.21
SEC61B-202ENST00000481573 CDK5RAP1Q96SZ6 601 aaKnown RBP13.76□□□□□ -0.21
SEC61B-202ENST00000481573 CNPY3Q9BT09 278 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 SLITRK6Q9H5Y7 841 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 GKN1Q9NS71 199 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 PIGVQ9NUD9 493 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 SMPD4Q9NXE4 827 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.76□□□□□ -0.21
SEC61B-202ENST00000481573 DNMT3LQ9UJW3 386 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 CDH7Q9ULB5 785 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 PAXBP1Q9Y5B6 917 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 CPQQ9Y646 472 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 NCOR1O75376 2440 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 KIAA1549LQ6ZVL6 1849 aa13.76□□□□□ -0.21
SEC61B-202ENST00000481573 SLC12A8A0AV02 714 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 I6L893 689 aaPredicted RBP13.75□□□□□ -0.21
SEC61B-202ENST00000481573 M0QYT0 321 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 BUB1O43683 1085 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 GREM1O60565 184 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 IGLV3-27P01718 113 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 CKMP06732 381 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 IL9P15248 144 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 SP100P23497 879 aaPredicted RBP13.75□□□□□ -0.21
SEC61B-202ENST00000481573 PSMA2P25787 234 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 WEE1P30291 646 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 HDAC4P56524 1084 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 FAM78AQ5JUQ0 283 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 PTCRAQ6ISU1 281 aaPredicted RBP13.75□□□□□ -0.21
SEC61B-202ENST00000481573 TADA2BQ86TJ2 420 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 ARID3BQ8IVW6 561 aaPredicted RBP13.75□□□□□ -0.21
SEC61B-202ENST00000481573 C17orf53Q8N3J3 647 aaPredicted RBP13.75□□□□□ -0.21
SEC61B-202ENST00000481573 NIPA2Q8N8Q9 360 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 ST13P5Q8NFI4 369 aaPredicted RBP13.75□□□□□ -0.21
SEC61B-202ENST00000481573 TPCN2Q8NHX9 752 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 FAM172AQ8WUF8 416 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 SLC39A13Q96H72 371 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 ASB16Q96NS5 453 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 GOLPH3Q9H4A6 298 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 FAM204AQ9H8W3 233 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 LZTFL1Q9NQ48 299 aa13.75□□□□□ -0.21
SEC61B-202ENST00000481573 ANLNQ9NQW6 1124 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms