RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 PDCLQ13371 301 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 RAPGEF1Q13905 1077 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 ZNF528Q3MIS6 628 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 TAF3Q5VWG9 929 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 SYPL2Q5VXT5 272 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 BTBD8Q5XKL5 378 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 TMEM92Q6UXU6 159 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 MAMSTRQ6ZN01 415 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 DHX40Q8IX18 779 aaKnown RBP11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 FAM71AQ8IYT1 594 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 ZNF276Q8N554 614 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 ALLCQ8N6M5 410 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 C1orf131Q8NDD1 294 aaKnown RBP11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 NKD2Q969F2 451 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 CPXM1Q96SM3 734 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 FUCA2Q9BTY2 467 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 DNAI2Q9GZS0 605 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 CNGB3Q9NQW8 809 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 ARHGEF4Q9NR80 690 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 ANO10Q9NW15 660 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 ZSCAN32Q9NX65 697 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 TBC1D14Q9P2M4 693 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 XPO7Q9UIA9 1087 aaKnown RBP11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 SIK3Q9Y2K2 1263 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 KIAA1549LQ6ZVL6 1849 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 FANCMQ8IYD8 2048 aa11.93□□□□□ -0.5
RAPGEF1-207ENST00000481260 PRRT4C9JH25 899 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 SGK1O00141 431 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 TSPAN3O60637 253 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 ADAM23O75077 832 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 ERBB2P04626 1255 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 CISD3P0C7P0 127 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 TYRP14679 529 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 UCHL3P15374 230 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 EEF1GP26641 437 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 TIE1P35590 1138 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 WASP42768 502 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 KIR2DL1P43626 348 aaPredicted RBP11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 PSEN1P49768 467 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 GAD2Q05329 585 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 NR1H3Q13133 447 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 TRIP4Q15650 581 aaPredicted RBP11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 C2CD6Q53TS8 623 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 FYB2Q5VWT5 728 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 C1orf228Q6PIY5 440 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 ENOSF1Q7L5Y1 443 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 NOP9Q86U38 636 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 TAC4Q86UU9 113 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 ARHGAP18Q8N392 663 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 DQX1Q8TE96 717 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 SLC20A1Q8WUM9 679 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 DDX1Q92499 740 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 HSFY1Q96LI6 401 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 PNKPQ96T60 521 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 ACOX2Q99424 681 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 BBS2Q9BXC9 721 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 IRF2BPLQ9H1B7 796 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 FAM207AQ9NSI2 230 aaPredicted RBP11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 DNAJC17Q9NVM6 304 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 INVSQ9Y283 1065 aa11.92□□□□□ -0.5
RAPGEF1-207ENST00000481260 SPTBN4Q9H254 2564 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 DCLK1O15075 740 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 TEX33O43247 280 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 GRAP2O75791 330 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 PAPSS2O95340 614 aaPredicted RBP11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 KLF8O95600 359 aaPredicted RBP11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 LTFP02788 710 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 SLC6A4P31645 630 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 MYL5Q02045 173 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 DMC1Q14565 340 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 SYCP1Q15431 976 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 STILQ15468 1287 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 PTPN20Q4JDL3 420 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 CT47A1Q5JQC4 288 aaPredicted RBP11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 EGFLAMQ63HQ2 1017 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 NADSYN1Q6IA69 706 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 MSANTD2Q6P1R3 559 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 RFWD3Q6PCD5 774 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 FAM183BPQ6ZVS7 135 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 TMEM110Q86TL2 294 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 SCML4Q8N228 414 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 SYNPOQ8N3V7 929 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 KIAA1958Q8N8K9 716 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 IL17RCQ8NAC3 791 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 TXNDC5Q8NBS9 432 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 NLRC4Q9NPP4 1024 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 MARK1Q9P0L2 795 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 CALCOCO1Q9P1Z2 691 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 LIMA1Q9UHB6 759 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 PCDHGA2Q9Y5H1 932 aa11.91□□□□□ -0.5
RAPGEF1-207ENST00000481260 SDK1Q7Z5N4 2213 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 SYCE3A1L190 88 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 LGALS16A8MUM7 142 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 F8VZ95 297 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 GFRA2O00451 464 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 CACNG3O60359 315 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 GFPT2O94808 682 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 PENKP01210 267 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms