RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 M0QYT0 321 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 EYA2O00167 538 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 ONECUT2O95948 504 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 PRKCBP05771 671 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 CYP21A2P08686 494 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 ELFN1P0C7U0 828 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 E2F1Q01094 437 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 BMPR2Q13873 1038 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 KCNJ12Q14500 433 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 FAM110CQ1W6H9 321 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 LSM12Q3MHD2 195 aaKnown RBP5.94□□□□□ -1.46
UPF3A-207ENST00000481131 MMS22LQ6ZRQ5 1243 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 Q6ZWC4 215 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 TRABD2AQ86V40 505 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 RAB11FIP4Q86YS3 637 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 C2CD5Q86YS7 1000 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 IL17REQ8NFR9 667 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 SLC22A17Q8WUG5 538 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 LINC00476Q8WZB0 136 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 PRR11Q96HE9 360 aaPredicted RBP5.94□□□□□ -1.46
UPF3A-207ENST00000481131 PAAF1Q9BRP4 392 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 ELAC1Q9H777 363 aaKnown RBP5.94□□□□□ -1.46
UPF3A-207ENST00000481131 MMRN2Q9H8L6 949 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 PDP2Q9P2J9 529 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 C19orf53Q9UNZ5 99 aaPredicted RBP5.94□□□□□ -1.46
UPF3A-207ENST00000481131 PCDHB7Q9Y5E2 793 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 SALL3Q9BXA9 1300 aa5.94□□□□□ -1.46
UPF3A-207ENST00000481131 EEA1Q15075 1411 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 LOC105369274A0A096LPK9 316 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 LOC102723532A0A0G2JNH3 316 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 AP4M1O00189 453 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 PSMD9O00233 223 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 CA12O43570 354 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 TJP3O95049 919 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 NXPH3O95157 252 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 TK1P04183 234 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 MPLP40238 635 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 PDE1AP54750 535 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 FAM3BP58499 235 aaPredicted RBP5.93□□□□□ -1.46
UPF3A-207ENST00000481131 PSG6Q00889 435 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 SF3A3Q12874 501 aaKnown RBP eCLIP5.93□□□□□ -1.464e-6■■■■□ 22.2
UPF3A-207ENST00000481131 TAF12Q16514 161 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 ST3GAL2Q16842 350 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 ZXDCQ2QGD7 858 aaPredicted RBP5.93□□□□□ -1.46
UPF3A-207ENST00000481131 P3H1Q32P28 736 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 ADCK5Q3MIX3 580 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 GALNTL6Q49A17 601 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 CCDC144NLQ6NUI1 221 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 Q6YL49 198 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 USP51Q70EK9 711 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 LRRTM4Q86VH4 590 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 TTC30AQ86WT1 665 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 VRK3Q8IV63 474 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 OR4N4Q8N0Y3 316 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.93□□□□□ -1.46
UPF3A-207ENST00000481131 OR6Y1Q8NGX8 325 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 PNISRQ8TF01 805 aaKnown RBP5.93□□□□□ -1.46
UPF3A-207ENST00000481131 AFG1LQ8WV93 481 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 ASB12Q8WXK4 309 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 USP13Q92995 863 aaPredicted RBP5.93□□□□□ -1.46
UPF3A-207ENST00000481131 C3orf49Q96BT1 292 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 TBATAQ96M53 351 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 PYM1Q9BRP8 204 aaKnown RBP5.93□□□□□ -1.46
UPF3A-207ENST00000481131 TTPALQ9BTX7 342 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 DPCDQ9BVM2 203 aaPredicted RBP5.93□□□□□ -1.46
UPF3A-207ENST00000481131 BRD8Q9H0E9 1235 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 ABHD16BQ9H3Z7 469 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 G6PC2Q9NQR9 355 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 DLL3Q9NYJ7 618 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 KIAA0586Q9BVV6 1533 aa5.93□□□□□ -1.46
UPF3A-207ENST00000481131 A0A1B0GVC2 190 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 GRID2IPA4D2P6 1211 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 MATN3O15232 486 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 ALADP13716 330 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 CREB1P16220 341 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 TGM1P22735 817 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 CNTFP26441 200 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 GSTM5P46439 218 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 CDK7P50613 346 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 TPTEP56180 551 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 BLOC1S1P78537 153 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 FOXI1Q12951 378 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 BFSP2Q13515 415 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 EFR3AQ14156 821 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 NBPF8Q3BBV2 869 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 CCDC70Q6NSX1 233 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 PEG10Q86TG7 708 aaKnown RBP5.92□□□□□ -1.46
UPF3A-207ENST00000481131 LRRC71Q8N4P6 559 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 HERVK_113Q902F9 699 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 NPIPB3Q92617 1050 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 LENG8Q96PV6 779 aaPredicted RBP5.92□□□□□ -1.46
UPF3A-207ENST00000481131 NAP1L4Q99733 375 aaKnown RBP5.92□□□□□ -1.46
UPF3A-207ENST00000481131 UBA5Q9GZZ9 404 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 SAP30LQ9HAJ7 183 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 SEPSECSQ9HD40 501 aaKnown RBP5.92□□□□□ -1.46
UPF3A-207ENST00000481131 KCNK9Q9NPC2 374 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 RIC8AQ9NPQ8 531 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 ARHGEF3Q9NR81 526 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 RXFP3Q9NSD7 469 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 SERTAD4Q9NUC0 356 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms