RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TNFRSF10AO00220 468 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 NOP56O00567 594 aaKnown RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 DCXO43602 365 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 FGFR3P22607 806 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 ACAT1P24752 427 aaKnown RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 USP17L24Q0WX57 530 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 SLC15A2Q16348 729 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 MGAT5BQ3V5L5 792 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 PPP2R2DQ66LE6 453 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 RINT1Q6NUQ1 792 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 USP17L6PQ6QN14 398 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 MFSD7Q6UXD7 560 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 PPIL6Q8IXY8 311 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 Q8N9G6 341 aaPredicted RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 TMEM102Q8N9M5 508 aaPredicted RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 PPP1R14CQ8TAE6 165 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 ACSF2Q96CM8 615 aaPredicted RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 HERC2P3Q9BVR0 1158 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 UNKQ9C0B0 810 aaKnown RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 PCDH9Q9HC56 1237 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 ITM2BQ9Y287 266 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 LTBP4Q8N2S1 1624 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 RNASEH2AO75792 299 aaKnown RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 C8BP07358 591 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 WEE2P0C1S8 567 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 PTPN2P17706 415 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 TMEM26Q6ZUK4 368 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 MCF2L2Q86YR7 1114 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 ZCRB1Q8TBF4 217 aaKnown RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 SHC3Q92529 594 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 DCPSQ96C86 337 aaKnown RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 CENPOQ9BU64 300 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 COQ10BQ9H8M1 238 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 CXorf21Q9HAI6 301 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 CLK4Q9HAZ1 481 aaKnown RBP21.91■■□□□ 1.1
SDF4-206ENST00000478938 PAPPAQ13219 1627 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 PRSS51A0A1B0GVH4 220 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 NOTOA8MTQ0 251 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 BPGMP07738 259 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 GAP43P17677 238 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 ELK3P41970 407 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 IDH3AP50213 366 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 SCNN1DP51172 638 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 MAPK10P53779 464 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 GDF10P55107 478 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 PKNOX1P55347 436 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 ABCB5Q2M3G0 1257 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 ZFP1Q6P2D0 407 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 IGFN1Q86VF2 1251 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 CTAGE3PQ8IX95 158 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 ZSWIM2Q8NEG5 633 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 PIWIL2Q8TC59 973 aaKnown RBP21.9■■□□□ 1.1
SDF4-206ENST00000478938 KLHL32Q96NJ5 620 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 THAP1Q9NVV9 213 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 TTLL3Q9Y4R7 772 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 XIRP1Q702N8 1843 aaKnown RBP21.9■■□□□ 1.1
SDF4-206ENST00000478938 KBTBD13C9JR72 458 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 ZNF701M0R085 212 aaPredicted RBP21.9■■□□□ 1.1
SDF4-206ENST00000478938 AIM2O14862 343 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 MGEA5O60502 916 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 STARD3NLO95772 234 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 VAMP7P51809 220 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 MS4A2Q01362 244 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 E2F2Q14209 437 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 PRR16Q569H4 304 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 C1orf220Q5T0J3 134 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 GALNT18Q6P9A2 607 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 SIX5Q8N196 739 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 PPM1NQ8N819 430 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 NAT8LQ8N9F0 302 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 VTI1AQ96AJ9 217 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 PALMDQ9NP74 551 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 ZBTB21Q9ULJ3 1066 aa21.9■■□□□ 1.1
SDF4-206ENST00000478938 FAM189A1O60320 539 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 GRM5P41594 1212 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 OLFM1Q99784 485 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 SAE1Q9UBE0 346 aaPredicted RBP21.89■■□□□ 1.09
SDF4-206ENST00000478938 PPP1R1BQ9UD71 204 aaPredicted RBP21.89■■□□□ 1.09
SDF4-206ENST00000478938 ZBTB39O15060 712 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 TRPC1P48995 793 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 NUDT2P50583 147 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 MRPS9P82933 396 aaKnown RBP21.89■■□□□ 1.09
SDF4-206ENST00000478938 NME3Q13232 169 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 SDR16C5Q8N3Y7 309 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 ANKK1Q8NFD2 765 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 HM13Q8TCT9 377 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 SNED1Q8TER0 1413 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 FIZ1Q96SL8 496 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 PNPOQ9NVS9 261 aa21.89■■□□□ 1.09
SDF4-206ENST00000478938 E7ESA3 106 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 CSPG5O95196 566 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 ZNF182P17025 639 aaPredicted RBP21.88■■□□□ 1.09
SDF4-206ENST00000478938 PRAMEP78395 509 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 NDUFA5Q16718 116 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 TTC39BQ5VTQ0 682 aaPredicted RBP21.88■■□□□ 1.09
SDF4-206ENST00000478938 DRICH1Q6PGQ1 229 aaPredicted RBP21.88■■□□□ 1.09
SDF4-206ENST00000478938 FAM47BQ8NA70 645 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 SEMA4DQ92854 862 aa21.88■■□□□ 1.09
SDF4-206ENST00000478938 USP13Q92995 863 aaPredicted RBP21.88■■□□□ 1.09
SDF4-206ENST00000478938 ZNF597Q96LX8 424 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms