RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 KHDC1Q4VXA5 237 aaKnown RBP11.2□□□□□ -0.62
VPS52-217ENST00000478934 BOLA3Q53S33 107 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 FAM47CQ5HY64 1035 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 BSPRYQ5W0U4 402 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 DENND5BQ6ZUT9 1274 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
VPS52-217ENST00000478934 FBXO27Q8NI29 283 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 DTX3LQ8TDB6 740 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 MICAL1Q8TDZ2 1067 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 KBTBD7Q8WVZ9 684 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 APOPT1Q96IL0 206 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 TBCBQ99426 244 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 CADM1Q9BY67 442 aaKnown RBP11.2□□□□□ -0.62
VPS52-217ENST00000478934 C20orf27Q9GZN8 174 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 ADAMTS10Q9H324 1103 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 RNPEPL1Q9HAU8 725 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 PAK5Q9P286 719 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 HESX1Q9UBX0 185 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 IQANK1A0A1B0GTG1 560 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 PDHXO00330 501 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 RFPL1O75677 317 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 BEST1O76090 585 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 RECQL4O94761 1208 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 TPBGLP0DKB5 382 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 TROVE2P10155 538 aaKnown RBP eCLIP11.2□□□□□ -0.62
VPS52-217ENST00000478934 ACAT1P24752 427 aaKnown RBP11.2□□□□□ -0.62
VPS52-217ENST00000478934 TKTP29401 623 aaKnown RBP11.2□□□□□ -0.62
VPS52-217ENST00000478934 GRM5P41594 1212 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 SERPINB4P48594 390 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 NDUFV1P49821 464 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 SOX4Q06945 474 aaPredicted RBP11.2□□□□□ -0.62
VPS52-217ENST00000478934 HSF5Q4G112 596 aaPredicted RBP11.2□□□□□ -0.62
VPS52-217ENST00000478934 RINLQ6ZS11 566 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 ZCCHC23Q6ZST2 131 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 FASTKD5Q7L8L6 764 aaKnown RBP11.2□□□□□ -0.62
VPS52-217ENST00000478934 MAP7D3Q8IWC1 876 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 SLC2A14Q8TDB8 520 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 C2CD2LO14523 706 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 COPEO14579 308 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 MMP3P08254 477 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 DHRS4L1P0CG22 281 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 MYL2P10916 166 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 VAV1P15498 845 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 ARFIP2P53365 341 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 SLC18A2Q05940 514 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 POU5F1BQ06416 359 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 PDK2Q15119 407 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 NBPF20Q3BBV1 942 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 C9orf57Q5W0N0 161 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 CES3Q6UWW8 571 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 SLC26A11Q86WA9 606 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 SNX27Q96L92 541 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 SIGLEC10Q96LC7 697 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 VPS11Q9H270 941 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 SSU72Q9NP77 194 aaKnown RBP11.19□□□□□ -0.62
VPS52-217ENST00000478934 PCMTD2Q9NV79 361 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 FETUBQ9UGM5 382 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 AP4E1Q9UPM8 1137 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.19□□□□□ -0.62
VPS52-217ENST00000478934 TM9SF1O15321 606 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 NEBLO76041 1014 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 GNAZP19086 355 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 CALB2P22676 271 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 PTDSS1P48651 473 aaKnown RBP11.19□□□□□ -0.62
VPS52-217ENST00000478934 PRKD1Q15139 912 aaPredicted RBP11.19□□□□□ -0.62
VPS52-217ENST00000478934 ZBTB6Q15916 424 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 C9orf131Q5VYM1 1079 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 C16orf46Q6P387 395 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 DPP9Q86TI2 863 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 OR6J1Q8NGC5 347 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 STK32AQ8WU08 396 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 SLC10A4Q96EP9 437 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 CSPG4P5Q96PW8 444 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 TRIM55Q9BYV6 548 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 DTLQ9NZJ0 730 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 CNTN3Q9P232 1028 aa11.19□□□□□ -0.62
VPS52-217ENST00000478934 MAGED2Q9UNF1 606 aaPredicted RBP11.19□□□□□ -0.62
VPS52-217ENST00000478934 MRPL42Q9Y6G3 142 aaKnown RBP11.19□□□□□ -0.62
VPS52-217ENST00000478934 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 BCLAF3A2AJT9 711 aaKnown RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 WDR27A2RRH5 827 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 BTBD19C9JJ37 291 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 DPYSL4O14531 572 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 DYNC1LI2O43237 492 aaPredicted RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 GPR32O75388 356 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 KRT36O76013 467 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 HAUS5O94927 633 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 AMHP03971 560 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 DLDP09622 509 aaKnown RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 PTPN4P29074 926 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 GTF2A2P52657 109 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 KPNB1Q14974 876 aaKnown RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 PARP6Q2NL67 630 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 SLC45A4Q5BKX6 768 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 TTC39BQ5VTQ0 682 aaPredicted RBP11.18□□□□□ -0.62
VPS52-217ENST00000478934 ARRDC4Q8NCT1 418 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 ADAM32Q8TC27 787 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 WDR60Q8WVS4 1066 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 DNAJB3Q8WWF6 145 aa11.18□□□□□ -0.62
VPS52-217ENST00000478934 SPDL1Q96EA4 605 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms