RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 PKD1L2Q7Z442 2459 aa16.58■□□□□ 0.25
GARNL3-215ENST00000478702 SGK1O00141 431 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 O00370 1275 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 SCAMP3O14828 347 aaKnown RBP16.58■□□□□ 0.24
GARNL3-215ENST00000478702 VDRP11473 427 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 P2RY2P41231 377 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 ZNF132P52740 706 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 BST2Q10589 180 aaKnown RBP16.58■□□□□ 0.24
GARNL3-215ENST00000478702 DHCR24Q15392 516 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 CT47A1Q5JQC4 288 aaPredicted RBP16.58■□□□□ 0.24
GARNL3-215ENST00000478702 RAB41Q5JT25 222 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 TRIM65Q6PJ69 517 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 RRAGAQ7L523 313 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 PIGZQ86VD9 579 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 FAM114A1Q8IWE2 563 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 ALLCQ8N6M5 410 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 IL17RCQ8NAC3 791 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 RBBP8NLQ8NC74 664 aaPredicted RBP16.58■□□□□ 0.24
GARNL3-215ENST00000478702 PIGKQ92643 395 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 GATA6Q92908 595 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 KREMEN1Q96MU8 473 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 SCNM1Q9BWG6 230 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 UBXN6Q9BZV1 441 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 ZDHHC4Q9NPG8 344 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 TMEM74BQ9NUR3 256 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 OSER1Q9NX31 292 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 CFAP97Q9P2B7 532 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 EVLQ9UI08 416 aaPredicted RBP16.58■□□□□ 0.24
GARNL3-215ENST00000478702 PCDHB4Q9Y5E5 795 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 USP3Q9Y6I4 520 aa16.58■□□□□ 0.24
GARNL3-215ENST00000478702 ATRXP46100 2492 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 GTPBP10A4D1E9 387 aaKnown RBP16.57■□□□□ 0.24
GARNL3-215ENST00000478702 XPO1O14980 1071 aaKnown RBP16.57■□□□□ 0.24
GARNL3-215ENST00000478702 MBD3O95983 291 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 HOXB3P14651 431 aaPredicted RBP16.57■□□□□ 0.24
GARNL3-215ENST00000478702 MTIF2P46199 727 aaKnown RBP16.57■□□□□ 0.24
GARNL3-215ENST00000478702 SLC8A3P57103 927 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 MAN2A1Q16706 1144 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 UAP1L1Q3KQV9 507 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 EMC10Q5UCC4 262 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 RHBDF2Q6PJF5 856 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 TXNDC5Q8NBS9 432 aaKnown RBP16.57■□□□□ 0.24
GARNL3-215ENST00000478702 DEFB124Q8NES8 71 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 NMUR1Q9HB89 426 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 HESX1Q9UBX0 185 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 MBD1Q9UIS9 605 aaPredicted RBP16.57■□□□□ 0.24
GARNL3-215ENST00000478702 KIAA1257Q9ULG3 409 aa16.57■□□□□ 0.24
GARNL3-215ENST00000478702 A0A0A0MRY4 1105 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 A0A1W2PQH9 124 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 E2F8A0AVK6 867 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 ADAM23O75077 832 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 KLF8O95600 359 aaPredicted RBP16.56■□□□□ 0.24
GARNL3-215ENST00000478702 SETSIPP0DME0 302 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 TIE1P35590 1138 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 PTGER3P43115 390 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 KIR2DL1P43626 348 aaPredicted RBP16.56■□□□□ 0.24
GARNL3-215ENST00000478702 PSEN1P49768 467 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 PDE4CQ08493 712 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 MAP7D1Q3KQU3 841 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 PKDCCQ504Y2 493 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 TRIM61Q5EBN2 209 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 LCLAT1Q6UWP7 414 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 ARMCX6Q7L4S7 300 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 SCD5Q86SK9 330 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 TMEFF1Q8IYR6 380 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 TFAP2BQ92481 460 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 PNKPQ96T60 521 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 ZSWIM1Q9BR11 485 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 CRACR2AQ9BSW2 395 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 NACA2Q9H009 215 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.56■□□□□ 0.24
GARNL3-215ENST00000478702 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.56■□□□□ 0.24
GARNL3-215ENST00000478702 CNTN6Q9UQ52 1028 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 PLXNB3Q9ULL4 1909 aa16.56■□□□□ 0.24
GARNL3-215ENST00000478702 ATXN2Q99700 1313 aaKnown RBP16.55■□□□□ 0.24
GARNL3-215ENST00000478702 RNF225M0QZC1 329 aaPredicted RBP16.55■□□□□ 0.24
GARNL3-215ENST00000478702 TULP2O00295 520 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 SLC9A3R1O14745 358 aaPredicted RBP16.55■□□□□ 0.24
GARNL3-215ENST00000478702 KAT7O95251 611 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 RARGP13631 454 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 BRD2P25440 801 aaKnown RBP16.55■□□□□ 0.24
GARNL3-215ENST00000478702 EIF2DP41214 584 aaKnown RBP16.55■□□□□ 0.24
GARNL3-215ENST00000478702 PLA2G4AP47712 749 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 STILQ15468 1287 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 KLHDC10Q6PID8 442 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 GBP6Q6ZN66 633 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 ENOSF1Q7L5Y1 443 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 CREBRFQ8IUR6 639 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 PHTF2Q8N3S3 785 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 ZNF276Q8N554 614 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 CLIC5Q9NZA1 410 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 NAGPAQ9UK23 515 aa16.55■□□□□ 0.24
GARNL3-215ENST00000478702 ALDH1A2O94788 518 aa16.54■□□□□ 0.24
GARNL3-215ENST00000478702 APODP05090 189 aa16.54■□□□□ 0.24
GARNL3-215ENST00000478702 ENGP17813 658 aa16.54■□□□□ 0.24
GARNL3-215ENST00000478702 SLC9A1P19634 815 aa16.54■□□□□ 0.24
GARNL3-215ENST00000478702 TKTL1P51854 596 aa16.54■□□□□ 0.24
GARNL3-215ENST00000478702 EXOC3L4Q17RC7 722 aa16.54■□□□□ 0.24
GARNL3-215ENST00000478702 MIIPQ5JXC2 388 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms