RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZDHHC24Q6UX98 284 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 KRT73Q86Y46 540 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 SPATA5Q8NB90 893 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 XAGE5Q8WWM1 108 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 ATG4AQ8WYN0 398 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 R3HDM4Q96D70 268 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 C5orf34Q96MH7 638 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 ISCA1Q9BUE6 129 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 SPRTNQ9H040 489 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 FAM83DQ9H4H8 585 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 GLOD4Q9HC38 313 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 TMEM8AQ9HCN3 771 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 HEYLQ9NQ87 328 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 PDGFCQ9NRA1 345 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 ELOVL5Q9NYP7 299 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 HDAC9Q9UKV0 1011 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 SLC39A10Q9ULF5 831 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 MAGED2Q9UNF1 606 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 NEO1Q92859 1461 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 BCORL1Q5H9F3 1711 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 FER1L4A9Z1Z3 1794 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 CDK13Q14004 1512 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 FAM234BA2RU67 622 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 ONECUT2O95948 504 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 FGAP02671 866 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 NPSP0C0P6 89 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 LRPAP1P30533 357 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 CHKAP35790 457 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 CPT1AP50416 773 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 GALNT1Q10472 559 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 FOXO1Q12778 655 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 MGAT5BQ3V5L5 792 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 ZACNQ401N2 412 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 CCDC38Q502W7 563 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 HSP90AB4PQ58FF6 505 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 RGS7BPQ6MZT1 257 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 MIS18BP1Q6P0N0 1132 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 CCDC174Q6PII3 467 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 CHSY1Q86X52 802 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 CACNA2D3Q8IZS8 1091 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 RAPGEF4Q8WZA2 1011 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 GLG1Q92896 1179 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 C18orf8Q96DM3 657 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 SNX27Q96L92 541 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 VPS16Q9H269 839 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 ZSCAN32Q9NX65 697 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 LUZP4Q9P127 313 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 DKK4Q9UBT3 224 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 ADAMTS5Q9UNA0 930 aa4.74□□□□□ -1.65
CDC42BPA-212ENST00000478573 SMIM35A0A1B0GVV1 85 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 AQP7P3A6NL99 342 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 SYT5O00445 386 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 PODXLO00592 558 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 PPEF2O14830 753 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 NPC1O15118 1278 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 NDST3O95803 873 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 TOP3BO95985 862 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 SFPQP23246 707 aaKnown RBP eCLIP4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 PLCD1P51178 756 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 HOXA4Q00056 320 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 SATB1Q01826 763 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 RABEP1Q15276 862 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 RAB30Q15771 203 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 RRAGBQ5VZM2 374 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 ARL6IP4Q66PJ3 421 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 PLAG1Q6DJT9 500 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 TRIM72Q6ZMU5 477 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 KIAA0408Q6ZU52 694 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 GLIS1Q8NBF1 620 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 SMCR8Q8TEV9 937 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 MUL1Q969V5 352 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 LRRC46Q96FV0 321 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 ASB2Q96Q27 587 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 RMDN3Q96TC7 470 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 MYLK2Q9H1R3 596 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 TBC1D23Q9NUY8 699 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 RGL1Q9NZL6 768 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 DNMT3BQ9UBC3 853 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 SH2B3Q9UQQ2 575 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 SSX2IPQ9Y2D8 614 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 CDY1Q9Y6F8 540 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 ADAMTSL3P82987 1691 aa4.73□□□□□ -1.65
CDC42BPA-212ENST00000478573 EHBP1L1Q8N3D4 1523 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 SUPT6HQ7KZ85 1726 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 CCDC189A1A4V9 331 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 A1L4Q6 167 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 H7C4K7 107 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 RAB27BO00194 218 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 RRP9O43818 475 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 EXOC3O60645 756 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 PDE8BO95263 885 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 IDEP14735 1019 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 TPH1P17752 444 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 EGR1P18146 543 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 PPIFP30405 207 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 PTDSS1P48651 473 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 DGKEP52429 567 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 TPTEP56180 551 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 FHL1Q13642 323 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms