RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 MSS51Q4VC12 460 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 TMEM259Q4ZIN3 620 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 PPP6R3Q5H9R7 873 aaPredicted RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ZNF667Q5HYK9 610 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 PRAMEF19Q5SWL8 479 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 OR6B2Q6IFH4 312 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 LPCAT2Q7L5N7 544 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 HEATR4Q86WZ0 1026 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 KCTD6Q8NC69 237 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 DNERQ8NFT8 737 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 RSAD2Q8WXG1 361 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 PGM2Q96G03 612 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ZNF317Q96PQ6 595 aaPredicted RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 B3GNT5Q9BYG0 378 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 NIFKQ9BYG3 293 aaKnown RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 HOMER3Q9NSC5 361 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 KLK14Q9P0G3 267 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 SIX4Q9UIU6 781 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CLEC11AQ9Y240 323 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 HTTP42858 3142 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ZNFX1Q9P2E3 1918 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 LIASO43766 372 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ZC3H11AO75152 810 aaKnown RBP eCLIP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 AGTP01019 485 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 PRKAR2AP13861 404 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 DNAJB1P25685 340 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 SLC1A1P43005 524 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 SCTRP47872 440 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 POLD2P49005 469 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 SULT1E1P49888 294 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ATXN1P54253 815 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 RTP1P59025 263 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 PTK6Q13882 451 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 HIC1Q14526 733 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 SGSM1Q2NKQ1 1148 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 TUBB8Q3ZCM7 444 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CELF3Q5SZQ8 465 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 MAP1SQ66K74 1059 aaPredicted RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CCDC81Q6ZN84 652 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 RIOX2Q8IUF8 465 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 UNC45BQ8IWX7 931 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 NDRG1Q92597 394 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 EMID1Q96A84 441 aaPredicted RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ZNF845Q96IR2 970 aaPredicted RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ANKRD36BP1Q96IX9 119 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 TTC25Q96NG3 672 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ELOVL4Q9GZR5 314 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 XYLT2Q9H1B5 865 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 SLC40A1Q9NP59 571 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CPSF3Q9UKF6 684 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 STYXL1Q9Y6J8 313 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 FAM189A1O60320 539 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ATP6V1G1O75348 118 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 LRCH4O75427 683 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CNMDO75829 334 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 MX2P20592 715 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 HOXD11P31277 338 aaPredicted RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 GALNSP34059 522 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CETN2P41208 172 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ERFP50548 548 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 TFDP1Q14186 410 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ANKRD20A8PQ5CZ79 823 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 PRPF38BQ5VTL8 546 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 IER5Q5VY09 327 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 RHBDF2Q6PJF5 856 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 RGS9BPQ6ZS82 235 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ARHGEF18Q6ZSZ5 1173 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 PHF13Q86YI8 300 aaPredicted RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 SCUBE3Q8IX30 993 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 GPC2Q8N158 579 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 OR8H1Q8NGG4 311 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CDCA5Q96FF9 252 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 SLC39A13Q96H72 371 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 FGD4Q96M96 766 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 FERD3LQ96RJ6 166 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 TGS1Q96RS0 853 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 MMADHCQ9H3L0 296 aaPredicted RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 WHRNQ9P202 907 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 FNIP2Q9P278 1114 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 BAIAP2L1Q9UHR4 511 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 MAGED2Q9UNF1 606 aaPredicted RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 COL11A1P12107 1806 aaPredicted RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 EIF4E1BA6NMX2 242 aaKnown RBP6.29□□□□□ -1.4
SH3D19-207ENST00000478503 TJP3O95049 919 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 MYBL1P10243 752 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 AKAP5P24588 427 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 RAD52P43351 418 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 NEK2P51955 445 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 TUBA1BP68363 451 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 CLDN10P78369 228 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 OVGP1Q12889 678 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 C6orf89Q6UWU4 347 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 MPZL3Q6UWV2 235 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 TUBA1AQ71U36 451 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 TAOK1Q7L7X3 1001 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 ACOT1Q86TX2 421 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 WDR49Q8IV35 697 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 KATNAL2Q8IYT4 538 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 EXD1Q8NHP7 514 aa6.29□□□□□ -1.4
SH3D19-207ENST00000478503 GRK7Q8WTQ7 553 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms