RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 NPHP3Q7Z494 1330 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 XIRP1Q702N8 1843 aaKnown RBP5.25□□□□□ -1.57
LMBR1-216ENST00000477983 NFAT5O94916 1531 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 E2F8A0AVK6 867 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 POC1B-GALNT4F8VUJ3 575 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 H3BML4 177 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 HMMRO75330 724 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 CSF1RP07333 972 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 DLDP09622 509 aaKnown RBP5.25□□□□□ -1.57
LMBR1-216ENST00000477983 HTR1BP28222 390 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 NR4A2P43354 598 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 SLC11A2P49281 568 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 WNT3P56703 355 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 SATB1Q01826 763 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 TRIP6Q15654 476 aaKnown RBP5.25□□□□□ -1.57
LMBR1-216ENST00000477983 MTHFSDQ2M296 383 aaKnown RBP5.25□□□□□ -1.57
LMBR1-216ENST00000477983 PLEKHG6Q3KR16 790 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 MCM10Q7L590 875 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 GALNT4Q8N4A0 578 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 TMEM57Q8N5G2 664 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 R3HDM4Q96D70 268 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 RITA1Q96K30 269 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 AIFM3Q96NN9 605 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 LENG8Q96PV6 779 aaPredicted RBP5.25□□□□□ -1.57
LMBR1-216ENST00000477983 SNX18Q96RF0 628 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 P2RX7Q99572 595 aaKnown RBP5.25□□□□□ -1.57
LMBR1-216ENST00000477983 MESP1Q9BRJ9 268 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 CHMP4AQ9BY43 222 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 SPRTNQ9H040 489 aaPredicted RBP5.25□□□□□ -1.57
LMBR1-216ENST00000477983 VPS16Q9H269 839 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 DCTPP1Q9H773 170 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 NMRK2Q9NPI5 230 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 PIH1D1Q9NWS0 290 aaKnown RBP5.25□□□□□ -1.57
LMBR1-216ENST00000477983 GABBR1Q9UBS5 961 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 RTL1A6NKG5 1358 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 RGPD1P0DJD0 1748 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 DLG5Q8TDM6 1919 aa5.25□□□□□ -1.57
LMBR1-216ENST00000477983 ABCC4O15439 1325 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 PTPRCP08575 1304 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 SOS1Q07889 1333 aaPredicted RBP5.24□□□□□ -1.57
LMBR1-216ENST00000477983 IGSF1Q8N6C5 1336 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 hCG_1984214I3L0E3 225 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 MYO1CO00159 1063 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 AKAP10O43572 662 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 HSPA6P17066 643 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 MCCP23508 829 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 MMP13P45452 471 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 PDE6CP51160 858 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 FOXG1P55316 489 aaPredicted RBP5.24□□□□□ -1.57
LMBR1-216ENST00000477983 GPSM2P81274 684 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 MYO1EQ12965 1108 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 ANKRD45Q5TZF3 282 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 SASS6Q6UVJ0 657 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 BRINP3Q76B58 766 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 DAAM2Q86T65 1068 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 RAVER1Q8IY67 606 aaKnown RBP5.24□□□□□ -1.57
LMBR1-216ENST00000477983 TERB1Q8NA31 727 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 XAGE5Q8WWM1 108 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 JPH3Q8WXH2 748 aaPredicted RBP5.24□□□□□ -1.57
LMBR1-216ENST00000477983 CAMKK2Q96RR4 588 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 CXorf36Q9H7Y0 433 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 ELOVL5Q9NYP7 299 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 ZNF180Q9UJW8 692 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 MRPS17Q9Y2R5 130 aaKnown RBP5.24□□□□□ -1.57
LMBR1-216ENST00000477983 ATP6V1DQ9Y5K8 247 aa5.24□□□□□ -1.57
LMBR1-216ENST00000477983 WDR17Q8IZU2 1322 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 SLIT3O75094 1523 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 KCNU1A8MYU2 1149 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 UBXN7O94888 489 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 PRKCBP05771 671 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 CHRM5P08912 532 aaPredicted RBP5.23□□□□□ -1.57
LMBR1-216ENST00000477983 ZNF853P0CG23 659 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 NPR1P16066 1061 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 ARFIP2P53365 341 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 TPTEP56180 551 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 FAM193AP78312 1265 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 ZSCAN23Q3MJ62 389 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 TTC22Q5TAA0 569 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 DEPDC1Q5TB30 811 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 TAF3Q5VWG9 929 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 FCRL6Q6DN72 434 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 AWAT2Q6E213 333 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 KIRREL2Q6UWL6 708 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 B3GNT9Q6UX72 402 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 GAS2L3Q86XJ1 694 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 ZNF280BQ86YH2 543 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 SLC15A3Q8IY34 581 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 DNAJC5GQ8N7S2 189 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 KBTBD7Q8WVZ9 684 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 LRRC59Q96AG4 307 aaKnown RBP5.23□□□□□ -1.57
LMBR1-216ENST00000477983 RSPRY1Q96DX4 576 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 ZC3H10Q96K80 434 aaKnown RBP5.23□□□□□ -1.57
LMBR1-216ENST00000477983 TRIM54Q9BYV2 358 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 CDH19Q9H159 772 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 KDRP35968 1356 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 KIAA0232Q92628 1395 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 ALS2Q96Q42 1657 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 CACNA1FO60840 1977 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 TNS3Q68CZ2 1445 aa5.23□□□□□ -1.57
LMBR1-216ENST00000477983 MED1Q15648 1581 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms