RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SNX29Q8TEQ0 813 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 KBTBD7Q8WVZ9 684 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 PCED1BQ96HM7 432 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 SYT15Q9BQS2 421 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 MMTAG2Q9BU76 263 aaKnown RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 ACE2Q9BYF1 805 aaPredicted RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 ASCL3Q9NQ33 180 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 TMEM30AQ9NV96 361 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 LARSQ9P2J5 1176 aaKnown RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 CHORDC1Q9UHD1 332 aaPredicted RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 CDH9Q9ULB4 789 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 AGAP1Q9UPQ3 857 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 SLC27A6Q9Y2P4 619 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 SNX9Q9Y5X1 595 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 STYXL1Q9Y6J8 313 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 USP9YO00507 2555 aaPredicted RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 ZNF638Q14966 1978 aaKnown RBP7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 CREBBPQ92793 2442 aa7.77□□□□□ -1.17
SPTLC1-205ENST00000477888 NPHP3-ACAD11A0A0J9YXS1 232 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 PP2D1A8MPX8 630 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 ANKRD63C9JTQ0 380 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 YKT6O15498 198 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 EFSO43281 561 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 FSBPO95073 299 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 SEMA4FO95754 770 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 WNT1P04628 370 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 ITGB3P05106 788 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 IGHV4-34P06331 123 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 ZDHHC11BP0C7U3 371 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 SCP2P22307 547 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 PRKCHP24723 683 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 YWHAQP27348 245 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 TUBP50607 506 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 SLC12A3P55017 1021 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 WNT7BP56706 349 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 C21orf59P57076 290 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 GABREP78334 506 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 CYP27A1Q02318 531 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 ST3GAL1Q11201 340 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 BNIP3Q12983 259 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 MAPRE1Q15691 268 aaKnown RBP7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 PROX2Q3B8N5 592 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 ARSHQ5FYA8 562 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 CDCP2Q5VXM1 449 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 ADALQ6DHV7 355 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 DPH6Q7L8W6 267 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 KANSL1Q7Z3B3 1105 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 ADAT2Q7Z6V5 191 aaKnown RBP7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 CACUL1Q86Y37 369 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 CSGALNACT2Q8N6G5 542 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 LRRC52Q8N7C0 313 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 MYCBPAPQ8TBZ2 947 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 OVCA2Q8WZ82 227 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 VCPIP1Q96JH7 1222 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 TM6SF1Q9BZW5 370 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 BTBD1Q9H0C5 482 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 CCSER2Q9H7U1 834 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 KCND2Q9NZV8 630 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 SEPT3Q9UH03 358 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 MAN2B2Q9Y2E5 1009 aa7.76□□□□□ -1.17
SPTLC1-205ENST00000477888 ABCA12Q86UK0 2595 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 SCN1AP35498 2009 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 A0A1W2PPC4 97 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 TISP43B9A030 160 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 IL18RAPO95256 599 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 PDGFRBP09619 1106 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 PLCG1P19174 1290 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 EPHA8P29322 1005 aaPredicted RBP7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 RXRGP48443 463 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 PGFP49763 221 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 BCAT1P54687 386 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 MFAP3P55082 362 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 CDH8P55286 799 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 GTF2BQ00403 316 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 TLE1Q04724 770 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 CAMK2GQ13555 558 aaPredicted RBP7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 ZNF234Q14588 700 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 IL17AQ16552 155 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 GEN1Q17RS7 908 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 KRT79Q5XKE5 535 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 SLFN12LQ6IEE8 588 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 IGF2-ASQ6U949 168 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 CCDC81Q6ZN84 652 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 NUP93Q8N1F7 819 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 PDZD8Q8NEN9 1154 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 OR2T3Q8NH03 318 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 FAM84AQ96KN4 292 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 FIZ1Q96SL8 496 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 MMS19Q96T76 1030 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 SEMA3CQ99985 751 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 KLF16Q9BXK1 252 aaPredicted RBP7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 POLR1BQ9H9Y6 1135 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 EBF2Q9HAK2 575 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 THSD1Q9NS62 852 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 PLK2Q9NYY3 685 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 IL37Q9NZH6 218 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 SIX4Q9UIU6 781 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 AGO2Q9UKV8 859 aaKnown RBP7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 BSNQ9UPA5 3926 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms