RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 STBD1O95210 358 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 PSMG1O95456 288 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 LINGO3P0C6S8 592 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 CSH1P0DML2 217 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 CSH2P0DML3 217 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 CCDC130P13994 396 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 CALRP27797 417 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 PRAMEP78395 509 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 DCAF6Q58WW2 860 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 RNF43Q68DV7 783 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 JADE1Q6IE81 842 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 CRELD2Q6UXH1 353 aaPredicted RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 REPS2Q8NFH8 660 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 HPDLQ96IR7 371 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 BTBD7Q9P203 1132 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 STARD13Q9Y3M8 1113 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 MAFBQ9Y5Q3 323 aaPredicted RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 ITM2AO43736 263 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 FARP2O94887 1054 aaPredicted RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 ZWINTO95229 277 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 AMHP03971 560 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 SRGAP2BP0DMP2 458 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 TXNP10599 105 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 DESP17661 470 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 MGAT1P26572 445 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 ADORA2AP29274 412 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 PLIN5Q00G26 463 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 RBBP5Q15291 538 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 FASTKD1Q53R41 847 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 SYDE1Q6ZW31 735 aaPredicted RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 HPS6Q86YV9 775 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 CELF6Q96J87 481 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 FAM167AQ96KS9 214 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 SEMA6AQ9H2E6 1030 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 WDR55Q9H6Y2 383 aaPredicted RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 MINDY3Q9H8M7 445 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 PPM1HQ9ULR3 514 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 ATXN2Q99700 1313 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 LACTBL1A8MY62 500 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 APOL1O14791 398 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 XPO1O14980 1071 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 TSPAN3O60637 253 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 CYP1A1P04798 512 aaPredicted RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 SNRPAP09012 282 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 ACO1P21399 889 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 ARL2P36404 184 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 C1QBPQ07021 282 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 KLF1Q13351 362 aaPredicted RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 SLC12A1Q13621 1099 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 HIC1Q14526 733 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 FBXO48Q5FWF7 155 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 SPDYCQ5MJ68 293 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 IER5Q5VY09 327 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 RWDD4Q6NW29 188 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 METTL7BQ6UX53 244 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 WDR75Q8IWA0 830 aaKnown RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 BRSK2Q8IWQ3 736 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 TP53INP2Q8IXH6 220 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 ARHGAP24Q8N264 748 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 ZNF669Q96BR6 464 aaPredicted RBP10.1□□□□□ -0.79
CMC1-209ENST00000477739 ADA2Q9NZK5 511 aa10.1□□□□□ -0.79
CMC1-209ENST00000477739 ADM5C9JUS6 153 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 ALOX15BO15296 676 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PHGDHO43175 533 aaKnown RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 CSPG5O95196 566 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 NUDT2P50583 147 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 YWHAEP62258 255 aaKnown RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 PTPN11Q06124 597 aaPredicted RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 ITKQ08881 620 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 MXD4Q14582 209 aaPredicted RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 ANO4Q32M45 955 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 MMEL1Q495T6 779 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 GALNTL6Q49A17 601 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 TMEM259Q4ZIN3 620 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 EMC10Q5UCC4 262 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PLEKHA7Q6IQ23 1121 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 TLDC1Q6P9B6 456 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 MAP7D3Q8IWC1 876 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 DIS3LQ8TF46 1054 aaKnown RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 OMDQ99983 421 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 OXCT2Q9BYC2 517 aaPredicted RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 LRMDAQ9H2I8 198 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 ASNSD1Q9NWL6 643 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 RPS6KL1Q9Y6S9 549 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 IRF6O14896 467 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PAPSS1O43252 624 aaPredicted RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 SMNDC1O75940 238 aaKnown RBP eCLIP10.09□□□□□ -0.79
CMC1-209ENST00000477739 KRT38O76015 456 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 DDNO94850 711 aaPredicted RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 MOCS2O96007 188 aaPredicted RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 SLC8A3P57103 927 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 CDK16Q00536 496 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 TMED1Q13445 227 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 SH2D4BQ5SQS7 431 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 PPP1R15BQ5SWA1 713 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 KCNT2Q6UVM3 1135 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 FAM183BPQ6ZVS7 135 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 RPS27LQ71UM5 84 aaKnown RBP10.09□□□□□ -0.79
CMC1-209ENST00000477739 WDR49Q8IV35 697 aa10.09□□□□□ -0.79
CMC1-209ENST00000477739 WDTC1Q8N5D0 677 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms