RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 HHLA1C9JL84 531 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 H7C0C1 242 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 H7C4K7 107 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 M0QYT0 321 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ENPP3O14638 875 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 RASGRF2O14827 1237 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 TRIM66O15016 1216 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ALOX15BO15296 676 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 CHADO15335 359 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 TP73O15350 636 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 RGS16O15492 202 aaPredicted RBP8.24□□□□□ -1.09
VMA21-203ENST00000477649 MTSS1O43312 755 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ATP2C2O75185 946 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 IFNB1P01574 187 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 CXCL10P02778 98 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ALDH2P05091 517 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 GSTA2P09210 222 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 NR1D1P20393 614 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 IL4RP24394 825 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ACAT1P24752 427 aaKnown RBP8.24□□□□□ -1.09
VMA21-203ENST00000477649 CYP2F1P24903 491 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 PHBP35232 272 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 RFC2P35250 354 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 MAGEA6P43360 314 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ATP5OP48047 213 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 CDK16Q00536 496 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ZNF33AQ06730 810 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 PDK1Q15118 436 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 LLGL1Q15334 1064 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 SLC45A4Q5BKX6 768 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 TTMPQ5BVD1 217 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 BRMS1LQ5PSV4 323 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 KIAA0319Q5VV43 1072 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 CD300LGQ6UXG3 332 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 RTN4RL1Q86UN2 441 aaPredicted RBP8.24□□□□□ -1.09
VMA21-203ENST00000477649 NPAS4Q8IUM7 802 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 PDIK1LQ8N165 341 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 PCDH19Q8TAB3 1148 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 RIN2Q8WYP3 895 aaPredicted RBP8.24□□□□□ -1.09
VMA21-203ENST00000477649 LRRC39Q96DD0 335 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 PIWIL1Q96J94 861 aaKnown RBP8.24□□□□□ -1.09
VMA21-203ENST00000477649 C8orf48Q96LL4 319 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 RTP3Q9BQQ7 232 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 TMEM121Q9BTD3 319 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 CAPS2Q9BXY5 557 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ULBP1Q9BZM6 244 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 KLC2Q9H0B6 622 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ADAM7Q9H2U9 754 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 EPB41L4BQ9H329 900 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 CDC42EP4Q9H3Q1 356 aaKnown RBP8.24□□□□□ -1.09
VMA21-203ENST00000477649 SEMA4AQ9H3S1 761 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 FBXO44Q9H4M3 255 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 DHX35Q9H5Z1 703 aaKnown RBP8.24□□□□□ -1.09
VMA21-203ENST00000477649 ABCC13Q9NSE7 274 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 RNF19AQ9NV58 838 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 TBC1D13Q9NVG8 400 aa8.24□□□□□ -1.09
VMA21-203ENST00000477649 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.24□□□□□ -1.09
VMA21-203ENST00000477649 C5orf60A6NFR6 353 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 E7ESA3 106 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 PIK3R2O00459 728 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 CLDN5O00501 218 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 PPP1R12AO14974 1030 aaPredicted RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 HCRTO43612 131 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 EFCAB14O75071 495 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 CDH16O75309 829 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 TADA2AO75478 443 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 GCATO75600 419 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 CD48P09326 243 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 HSPA1AP0DMV8 641 aaKnown RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 HSPA1BP0DMV9 641 aaKnown RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 SLC2A3P11169 496 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 MX2P20592 715 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 SERPINB6P35237 376 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 RPL22P35268 128 aaKnown RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 ADRA1BP35368 520 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 MAGEA4P43358 317 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 BRCC3P46736 316 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 LMAN1P49257 510 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 CXCR3P49682 368 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 CTCFP49711 727 aaPredicted RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 AFF1P51825 1210 aaKnown RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 DYNLT1P63172 113 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 SARNPP82979 210 aaKnown RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 DMTNQ08495 405 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 MBTPS1Q14703 1052 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 PAFAH1B3Q15102 231 aaKnown RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 TAF5Q15542 800 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 HIF1AQ16665 826 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 TNFAIP8L3Q5GJ75 292 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 PPP6R3Q5H9R7 873 aaPredicted RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 CLLU1OSQ5K130 101 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 SH3PXD2AQ5TCZ1 1133 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 ZNF280DQ6N043 979 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 CCDC25Q86WR0 208 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 TDRPQ86YL5 185 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 PQLC3Q8N755 202 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 NAT8LQ8N9F0 302 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 MCUQ8NE86 351 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 ZMIZ2Q8NF64 920 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 PRCCQ92733 491 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms