RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16■□□□□ 0.15
SEC13-215ENST00000477547 MARCH2Q9P0N8 246 aa16■□□□□ 0.15
SEC13-215ENST00000477547 TMEM59LQ9UK28 342 aa16■□□□□ 0.15
SEC13-215ENST00000477547 STAP1Q9ULZ2 295 aa16■□□□□ 0.15
SEC13-215ENST00000477547 NAALADL1Q9UQQ1 740 aa16■□□□□ 0.15
SEC13-215ENST00000477547 USTQ9Y2C2 406 aa16■□□□□ 0.15
SEC13-215ENST00000477547 NR2E1Q9Y466 385 aa16■□□□□ 0.15
SEC13-215ENST00000477547 CPQQ9Y646 472 aa16■□□□□ 0.15
SEC13-215ENST00000477547 ZFP37Q9Y6Q3 630 aaPredicted RBP16■□□□□ 0.15
SEC13-215ENST00000477547 KMT2EQ8IZD2 1858 aa16■□□□□ 0.15
SEC13-215ENST00000477547 TICRRQ7Z2Z1 1910 aa16■□□□□ 0.15
SEC13-215ENST00000477547 COL4A3Q01955 1670 aa16■□□□□ 0.15
SEC13-215ENST00000477547 SIGLEC16A6NMB1 481 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 C2CD4DB7Z1M9 353 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 MSI1O43347 362 aaKnown RBP15.99■□□□□ 0.15
SEC13-215ENST00000477547 TBX18O95935 607 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 CYP1A2P05177 515 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 MATKP42679 507 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 SULT1E1P49888 294 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 GPC5P78333 572 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 MAMLD1Q13495 774 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 FAM78AQ5JUQ0 283 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 PPP1R15BQ5SWA1 713 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 SYPL2Q5VXT5 272 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 TRNP1Q6NT89 227 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 POTEHQ6S545 545 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 ZNF276Q8N554 614 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 SMARCD2Q92925 531 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 RPGRIP1Q96KN7 1286 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 ASB16Q96NS5 453 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 CYP2S1Q96SQ9 504 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 NUP85Q9BW27 656 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 RNF38Q9H0F5 515 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 MRPL47Q9HD33 250 aaKnown RBP15.99■□□□□ 0.15
SEC13-215ENST00000477547 DNMT3LQ9UJW3 386 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 INTUQ9ULD6 942 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 ARHGAP26Q9UNA1 814 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 REXO2Q9Y3B8 237 aaKnown RBP15.99■□□□□ 0.15
SEC13-215ENST00000477547 PCDHA13Q9Y5I0 950 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 ZDBF2Q9HCK1 2354 aa15.99■□□□□ 0.15
SEC13-215ENST00000477547 LAMP2P13473 410 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 GPD1P21695 349 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 SDC4P31431 198 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 NOS2P35228 1153 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 RPL7AP62424 266 aaKnown RBP15.98■□□□□ 0.15
SEC13-215ENST00000477547 PITX1P78337 314 aaPredicted RBP15.98■□□□□ 0.15
SEC13-215ENST00000477547 SLC7A9P82251 487 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 USP4Q13107 963 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 ARCQ7LC44 396 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 KIAA1328Q86T90 577 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 ARID3BQ8IVW6 561 aaPredicted RBP15.98■□□□□ 0.15
SEC13-215ENST00000477547 SUGP1Q8IWZ8 645 aaKnown RBP15.98■□□□□ 0.15
SEC13-215ENST00000477547 TTC16Q8NEE8 873 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 ADAM32Q8TC27 787 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 RFFLQ8WZ73 363 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 USP13Q92995 863 aaPredicted RBP15.98■□□□□ 0.15
SEC13-215ENST00000477547 SERPINB11Q96P15 392 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 KCNF1Q9H3M0 494 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 KIF9Q9HAQ2 790 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 CTTNBP2NLQ9P2B4 639 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 EPS15L1Q9UBC2 864 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 SFMBT1Q9UHJ3 866 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 MYO10Q9HD67 2058 aa15.98■□□□□ 0.15
SEC13-215ENST00000477547 ZFHX2Q9C0A1 2572 aaPredicted RBP15.98■□□□□ 0.15
SEC13-215ENST00000477547 COL4A2P08572 1712 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 SYNJ2BP-COX16A0A087WUM0 186 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 SLC12A8A0AV02 714 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 C2CD4BA6NLJ0 364 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 DPYSL4O14531 572 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 IRAK2O43187 625 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 IRF1P10914 325 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 FCARP24071 287 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 RFC1P35251 1148 aaPredicted RBP15.97■□□□□ 0.15
SEC13-215ENST00000477547 VAV2P52735 878 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 KRT83P78385 493 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 OTUD1Q5VV17 481 aaPredicted RBP15.97■□□□□ 0.15
SEC13-215ENST00000477547 MTSS1LQ765P7 747 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 ZNF564Q8TBZ8 553 aaPredicted RBP15.97■□□□□ 0.15
SEC13-215ENST00000477547 RXFP2Q8WXD0 754 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 ZFRQ96KR1 1074 aaKnown RBP15.97■□□□□ 0.15
SEC13-215ENST00000477547 CFAP57Q96MR6 1250 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 DDX23Q9BUQ8 820 aaKnown RBP15.97■□□□□ 0.15
SEC13-215ENST00000477547 TRIM7Q9C029 511 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 TDP1Q9NUW8 608 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 DDIT4Q9NX09 232 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 RRN3Q9NYV6 651 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 COX16Q9P0S2 106 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 UVRAGQ9P2Y5 699 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 ANAPC7Q9UJX3 599 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 TFR2Q9UP52 801 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 CCL26Q9Y258 94 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 MIA3Q5JRA6 1907 aa15.97■□□□□ 0.15
SEC13-215ENST00000477547 TRUB2O95900 331 aaKnown RBP15.96■□□□□ 0.15
SEC13-215ENST00000477547 HMBSP08397 361 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 PDGFRAP16234 1089 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 DESP17661 470 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 WEE1P30291 646 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 PTPN9P43378 593 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 VCPP55072 806 aaKnown RBP15.96■□□□□ 0.15
SEC13-215ENST00000477547 ZXDAP98168 799 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms