RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	NFYC	Q13952	458 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	STIL	Q15468	1287 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	MAPK6	Q16659	721 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	WDR72	Q3MJ13	1102 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	ZNF568	Q3ZCX4	644 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	TMEM119	Q4V9L6	283 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	MIIP	Q5JXC2	388 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	L1TD1	Q5T7N2	865 aa	Known RBP	4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	ZNF618	Q5T7W0	954 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	RESP18	Q5W5W9	173 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	RINT1	Q6NUQ1	792 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	TSHZ1	Q6ZSZ6	1077 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	CATSPER4	Q7RTX7	472 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	DEFB128	Q7Z7B8	93 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	UBE2Q1	Q7Z7E8	422 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	RPAIN	Q86UA6	219 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	SYCP3	Q8IZU3	236 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	LRRC71	Q8N4P6	559 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	RNF149	Q8NC42	400 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	TRAPPC12	Q8WVT3	735 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	PRPF31	Q8WWY3	499 aa	Known RBP	4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	CFHR4	Q92496	578 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	TMEM143	Q96AN5	459 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	ZNF503	Q96F45	646 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	BICD1	Q96G01	975 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	CDC6	Q99741	560 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	SH2D3A	Q9BRG2	576 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	TCHP	Q9BT92	498 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	TRIM6	Q9C030	488 aa	Predicted RBP	4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	TNMD	Q9H2S6	317 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	DHX33	Q9H6R0	707 aa	Known RBP	4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	PARVG	Q9HBI0	331 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	IL23A	Q9NPF7	189 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	KMT5A	Q9NQR1	393 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	EXOC1	Q9NV70	894 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	RMND1	Q9NWS8	449 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	GALNT8	Q9NY28	637 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	DACT1	Q9NYF0	836 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	SEL1L	Q9UBV2	794 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	EXOC7	Q9UPT5	735 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	CDY2A	Q9Y6F7	541 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	SLC30A1	Q9Y6M5	507 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	MYH9	P35579	1960 aa	Known RBP	4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	FRMPD3	Q5JV73	1810 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	GRIN2D	O15399	1336 aa		4.92	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	PCNT	O95613	3336 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289		A0A087WZ62	844 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289		A0A1B0GVL5	298 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289		K7ENM7	598 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	HIP1R	O75146	1068 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	BAIAP3	O94812	1187 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	ZNF202	O95125	648 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	MBD3	O95983	291 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	FAM153B	P0C7A2	387 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	IQCF3	P0C7M6	154 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	GHR	P10912	638 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	ACO1	P21399	889 aa	Known RBP	4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	AXL	P30530	894 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	CYP2C18	P33260	490 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	ADCY8	P40145	1251 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	PPP1R2	P41236	205 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	RAB27A	P51159	221 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	PEX3	P56589	373 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	POU5F1B	Q06416	359 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	RBL2	Q08999	1139 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	LAMTOR4	Q0VGL1	99 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	STIM1	Q13586	685 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	IL17A	Q16552	155 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	USP39	Q53GS9	565 aa	Known RBP	4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	ZMAT1	Q5H9K5	638 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	CNNM4	Q6P4Q7	775 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	SHC4	Q6S5L8	630 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	CXXC5	Q7LFL8	322 aa	Known RBP	4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	KIAA0319L	Q8IZA0	1049 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	BAD	Q92934	168 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	EXTL1	Q92935	676 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	PGBD4	Q96DM1	585 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	SCLY	Q96I15	445 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	SCYL1	Q96KG9	808 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	RNPC3	Q96LT9	517 aa	Known RBP	4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	MMTAG2	Q9BU76	263 aa	Known RBP	4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	IFIH1	Q9BYX4	1025 aa	Known RBP	4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	CCDC113	Q9H0I3	377 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	MRPL44	Q9H9J2	332 aa	Known RBP	4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	CHST12	Q9NRB3	414 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	C1orf112	Q9NSG2	853 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	PANK4	Q9NVE7	773 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	TBX21	Q9UL17	535 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	NR2E1	Q9Y466	385 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	PCDHA9	Q9Y5H5	950 aa		4.91	□□□□□ -1.62
NSMCE4A-208	ENST00000477289	DOCK5	Q9H7D0	1870 aa		4.9	□□□□□ -1.62
NSMCE4A-208	ENST00000477289		A0A087WWV3	80 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	IGKV6-21	A0A0C4DH24	114 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PVALEF	A0A1B0GWK0	134 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CCDC66	A2RUB6	948 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms