RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 ARL4AP40617 200 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 ALDH7A1P49419 539 aaKnown RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 SLC10A2Q12908 348 aaPredicted RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 MTMR3Q13615 1198 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 IKBKEQ14164 716 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 DPYSL2Q16555 572 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 TTMPQ5BVD1 217 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 FAM72AQ5TYM5 149 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 FAM72DQ6L9T8 149 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 FUT10Q6P4F1 479 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 PRSS55Q6UWB4 352 aaPredicted RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 RSPO2Q6UXX9 243 aaPredicted RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 FAM72BQ86X60 149 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 ZNF333Q96JL9 665 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 C9orf72Q96LT7 481 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 CSPG4P5Q96PW8 444 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 SLC2A13Q96QE2 648 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 NCAPGQ9BPX3 1015 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 ADAM7Q9H2U9 754 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 PABPC3Q9H361 631 aaKnown RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 MARCH5Q9NX47 278 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 GOLGA6AQ9NYA3 693 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 SFMBT1Q9UHJ3 866 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 FZD10Q9ULW2 581 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 H0YGN5 161 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 I6L893 689 aaPredicted RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 KCNN4O15554 427 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 ACRP10323 421 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 RPL17P18621 184 aaKnown RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 RBL1P28749 1068 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 RPL22P35268 128 aaKnown RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 SLCO1A2P46721 670 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 ROR1Q01973 937 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 GAD2Q05329 585 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 KRT71Q3SY84 523 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 RTP2Q5QGT7 225 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 DENND2CQ68D51 928 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 CAPN12Q6ZSI9 719 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 BHLHA9Q7RTU4 235 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 DCP1BQ8IZD4 617 aaKnown RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 BCL7CQ8WUZ0 217 aaPredicted RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 NT5C3BQ969T7 300 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 TXLNGYQ9BZA5 131 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 CRISPLD2Q9H0B8 497 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 SIK2Q9H0K1 926 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 EPB41L4BQ9H329 900 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 WDCPQ9H6R7 721 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 TPX2Q9ULW0 747 aaKnown RBP6.89□□□□□ -1.31
CCDC30-209ENST00000477155 NFS1Q9Y697 457 aa6.89□□□□□ -1.31
CCDC30-209ENST00000477155 PDE4DIPQ5VU43 2346 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 GOLGA6L10A6NI86 522 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 F5H423 210 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 TMEM189-UBE2V1I3L0A0 370 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 DNALI1O14645 258 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 RARGP13631 454 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 CSF2RAP15509 400 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 ADRA1BP35368 520 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 CTCFP49711 727 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 LBX1P52954 281 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 BASP1P80723 227 aaKnown RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 ZNF844Q08AG5 666 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 NOMO1Q15155 1222 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 LRRC26Q2I0M4 334 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 MGAT5BQ3V5L5 792 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 FAXCQ5TGI0 409 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 BTBD8Q5XKL5 378 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 RHBDF2Q6PJF5 856 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 CRIPAKQ8N1N5 446 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 TOX2Q96NM4 488 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 SEPT5Q99719 369 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 ZNF670Q9BS34 389 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 ZCWPW1Q9H0M4 648 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 CDC42EP4Q9H3Q1 356 aaKnown RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 MSI1O43347 362 aaKnown RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 BANF1O75531 89 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 CXCL10P02778 98 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 MYZAPP0CAP1 466 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 PAX3P23760 479 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 YWHAGP61981 247 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 DUSP4Q13115 394 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 SLMAPQ14BN4 828 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 EFHC2Q5JST6 749 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 ANKRD22Q5VYY1 191 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 SLC9A4Q6AI14 798 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 TTC19Q6DKK2 380 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 PM20D1Q6GTS8 502 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 ZNF280DQ6N043 979 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 HIBCHQ6NVY1 386 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 TP53INP2Q8IXH6 220 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 RNF139Q8WU17 664 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 RBM15Q96T37 977 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 SH3GL2Q99962 352 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 TKTL2Q9H0I9 626 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 NMUR1Q9HB89 426 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 PCDH9Q9HC56 1237 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 WDR6Q9NNW5 1121 aaKnown RBP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 TBX21Q9UL17 535 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 PCDHB5Q9Y5E4 795 aa6.88□□□□□ -1.31
CCDC30-209ENST00000477155 SF3B1O75533 1304 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC30-209ENST00000477155 MYO18AQ92614 2054 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms