RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TCERG1LQ5VWI1 586 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 ISM2Q6H9L7 571 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 KIAA1324Q6UXG2 1013 aaKnown RBP12.25□□□□□ -0.45
VARS2-208ENST00000477052 CCDC186Q7Z3E2 898 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 TRMT11Q7Z4G4 463 aaKnown RBP12.25□□□□□ -0.45
VARS2-208ENST00000477052 PIGZQ86VD9 579 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 CACUL1Q86Y37 369 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 DENND1CQ8IV53 801 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 CCDC150Q8NCX0 1101 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 SORCS1Q8WY21 1168 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 TMEM176AQ96HP8 235 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 DUSP9Q99956 384 aaKnown RBP12.25□□□□□ -0.45
VARS2-208ENST00000477052 NUSAP1Q9BXS6 441 aaKnown RBP12.25□□□□□ -0.45
VARS2-208ENST00000477052 RAB20Q9NX57 234 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 MARK1Q9P0L2 795 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 PILRBQ9UKJ0 227 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 STARD13Q9Y3M8 1113 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 USP3Q9Y6I4 520 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 CEP192Q8TEP8 1941 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 ZFHX4Q86UP3 3567 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 SPAARA0A1B0GVQ0 90 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 A0A1W2PQ27 194 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 A0A1W2PQ64 194 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 A0A1W2PQD8 194 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 SLC12A8A0AV02 714 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 TRIM49BA6NDI0 452 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 PIK3R2O00459 728 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 TSPAN3O60637 253 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 RALAP11233 206 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 TRIM21P19474 475 aaKnown RBP12.24□□□□□ -0.45
VARS2-208ENST00000477052 PI4KAP42356 2102 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 ZNF33AQ06730 810 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 FYB2Q5VWT5 728 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 ANKRD40Q6AI12 368 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 SDE2Q6IQ49 451 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 KLHDC10Q6PID8 442 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 NUDT18Q6ZVK8 323 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 RSRC2Q7L4I2 434 aaKnown RBP12.24□□□□□ -0.45
VARS2-208ENST00000477052 TRIML1Q8N9V2 468 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 FBXL13Q8NEE6 735 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 UBA3Q8TBC4 463 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 EDEM1Q92611 657 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 MRGPRX1Q96LB2 322 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 HSPA12BQ96MM6 686 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 GABRG3Q99928 467 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 ULBP1Q9BZM6 244 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 PNPLA8Q9NP80 782 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 EVLQ9UI08 416 aaPredicted RBP12.24□□□□□ -0.45
VARS2-208ENST00000477052 AGO1Q9UL18 857 aaKnown RBP12.24□□□□□ -0.45
VARS2-208ENST00000477052 STON1Q9Y6Q2 735 aa12.24□□□□□ -0.45
VARS2-208ENST00000477052 PLXND1Q9Y4D7 1925 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 CETN3O15182 167 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 AP5Z1O43299 807 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 PENKP01210 267 aaPredicted RBP12.23□□□□□ -0.45
VARS2-208ENST00000477052 EPB41P11171 864 aaKnown RBP12.23□□□□□ -0.45
VARS2-208ENST00000477052 GTF2H1P32780 548 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 IL12RB1P42701 662 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 TKTL1P51854 596 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 MFAP3P55082 362 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 YWHAGP61981 247 aaKnown RBP eCLIP12.23□□□□□ -0.45
VARS2-208ENST00000477052 FAM193AP78312 1265 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 SHC2P98077 582 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 PDE4CQ08493 712 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 BYSLQ13895 437 aaKnown RBP12.23□□□□□ -0.45
VARS2-208ENST00000477052 EDRF1Q3B7T1 1238 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 FUT11Q495W5 492 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 PREPLQ4J6C6 727 aaPredicted RBP12.23□□□□□ -0.45
VARS2-208ENST00000477052 BHLHA9Q7RTU4 235 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 KCNV2Q8TDN2 545 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 SCAND2PQ9GZW5 306 aaPredicted RBP12.23□□□□□ -0.45
VARS2-208ENST00000477052 MARCH2Q9P0N8 246 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 SFMBT1Q9UHJ3 866 aa12.23□□□□□ -0.45
VARS2-208ENST00000477052 CACNA1EQ15878 2313 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 MSI1O43347 362 aaKnown RBP12.22□□□□□ -0.45
VARS2-208ENST00000477052 CEACAM1P13688 526 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 CD19P15391 556 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 LMAN2Q12907 356 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 CUL2Q13617 745 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 RAB41Q5JT25 222 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 TMEM215Q68D42 235 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 ARHGAP17Q68EM7 881 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 SLC23A3Q6PIS1 610 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 SLC36A4Q6YBV0 504 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 RGL4Q8IZJ4 473 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 FMR1NBQ8N0W7 255 aaPredicted RBP12.22□□□□□ -0.45
VARS2-208ENST00000477052 ZNF366Q8N895 744 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 ANKRD52Q8NB46 1076 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 CAMK1GQ96NX5 476 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 MKRN2Q9H000 416 aaKnown RBP12.22□□□□□ -0.45
VARS2-208ENST00000477052 CLIC5Q9NZA1 410 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 FBXO10Q9UK96 956 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 TSPAN16Q9UKR8 245 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 SLC6A14Q9UN76 642 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 WASF3Q9UPY6 502 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 AKAP13Q12802 2813 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 CFAP47Q6ZTR5 3102 aa12.22□□□□□ -0.45
VARS2-208ENST00000477052 YJEFN3A6XGL0 299 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 KCNJ18B7U540 433 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 E7ENQ6 273 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 ZBTB24O43167 697 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms