RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PCED1AQ9H1Q7 454 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 DPEP3Q9H4B8 488 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 PARVGQ9HBI0 331 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 ITGA11Q9UKX5 1188 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 CLCA2Q9UQC9 943 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 GOLGA8IPA6NC78 632 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 GOLGA8JA6NMD2 632 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 KLK10O43240 276 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 TSPAN3O60637 253 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 WNT1P04628 370 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 ITGAVP06756 1048 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 CDK4P11802 303 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 WARSP23381 471 aaKnown RBP16.23■□□□□ 0.19
SMG5-204ENST00000476954 CD27P26842 260 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 TRAPPC10P48553 1259 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 INSM1Q01101 510 aaPredicted RBP16.23■□□□□ 0.19
SMG5-204ENST00000476954 POU5F1Q01860 360 aaKnown RBP16.23■□□□□ 0.19
SMG5-204ENST00000476954 VAC14Q08AM6 782 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 NFATC3Q12968 1075 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 ZNF234Q14588 700 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 DTHD1Q6ZMT9 781 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 DCBLD1Q8N8Z6 715 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 PDZD8Q8NEN9 1154 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 C8orf76Q96K31 380 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 ELF4Q99607 663 aaPredicted RBP16.23■□□□□ 0.19
SMG5-204ENST00000476954 KLF16Q9BXK1 252 aaPredicted RBP16.23■□□□□ 0.19
SMG5-204ENST00000476954 B3GNT5Q9BYG0 378 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 PDE11AQ9HCR9 933 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 FBXO10Q9UK96 956 aa16.23■□□□□ 0.19
SMG5-204ENST00000476954 NOL7Q9UMY1 257 aaKnown RBP16.23■□□□□ 0.19
SMG5-204ENST00000476954 USP9YO00507 2555 aaPredicted RBP16.22■□□□□ 0.19
SMG5-204ENST00000476954 TERTO14746 1132 aaKnown RBP16.22■□□□□ 0.19
SMG5-204ENST00000476954 SEMA4FO95754 770 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 MPOP05164 745 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 EPHX1P07099 455 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 ABCB4P21439 1286 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 MFAP3P55082 362 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 UCNP55089 124 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 CDH8P55286 799 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 KCNA1Q09470 495 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 DPH6Q7L8W6 267 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 DHX40Q8IX18 779 aaKnown RBP16.22■□□□□ 0.19
SMG5-204ENST00000476954 CACTINQ8WUQ7 758 aaKnown RBP16.22■□□□□ 0.19
SMG5-204ENST00000476954 KCNE4Q8WWG9 221 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 HPDLQ96IR7 371 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 SLC6A18Q96N87 628 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 NACA2Q9H009 215 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 LHX5Q9H2C1 402 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 IGSF5Q9NSI5 407 aa16.22■□□□□ 0.19
SMG5-204ENST00000476954 UTP20O75691 2785 aaKnown RBP16.22■□□□□ 0.19
SMG5-204ENST00000476954 IGHV4-34P06331 123 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 ZDHHC11BP0C7U3 371 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 PTPN1P18031 435 aaKnown RBP16.21■□□□□ 0.19
SMG5-204ENST00000476954 SCP2P22307 547 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 C21orf59P57076 290 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 BNIP3Q12983 259 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 SNX30Q5VWJ9 437 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 ZNF366Q8N895 744 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 EXD3Q8N9H8 876 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 OR5B17Q8NGF7 314 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 OVCA2Q8WZ82 227 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 CDK5RAP3Q96JB5 506 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 RBAKQ9NYW8 714 aaPredicted RBP16.21■□□□□ 0.19
SMG5-204ENST00000476954 ANKMY1Q9P2S6 941 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 CLEC4EQ9ULY5 219 aa16.21■□□□□ 0.19
SMG5-204ENST00000476954 MDM4O15151 490 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 VILLO15195 856 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 DFNA5O60443 496 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 TLR5O60602 858 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 RTN3O95197 1032 aaPredicted RBP16.2■□□□□ 0.18
SMG5-204ENST00000476954 PRPHP41219 470 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 TUBP50607 506 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 ZNF132P52740 706 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 GNL2Q13823 731 aaKnown RBP16.2■□□□□ 0.18
SMG5-204ENST00000476954 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 C6orf132Q5T0Z8 1188 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 RBBP8NLQ8NC74 664 aaPredicted RBP16.2■□□□□ 0.18
SMG5-204ENST00000476954 OR2T3Q8NH03 318 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 NOC3LQ8WTT2 800 aaKnown RBP16.2■□□□□ 0.18
SMG5-204ENST00000476954 SNRNP27Q8WVK2 155 aaKnown RBP16.2■□□□□ 0.18
SMG5-204ENST00000476954 RFFLQ8WZ73 363 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 ZNF578Q96N58 590 aaPredicted RBP16.2■□□□□ 0.18
SMG5-204ENST00000476954 MMS19Q96T76 1030 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 ACE2Q9BYF1 805 aaPredicted RBP16.2■□□□□ 0.18
SMG5-204ENST00000476954 FAM117AQ9C073 453 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 ELOVL4Q9GZR5 314 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 EBF2Q9HAK2 575 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 BLOC1S4Q9NUP1 217 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 SLC27A6Q9Y2P4 619 aa16.2■□□□□ 0.18
SMG5-204ENST00000476954 HEMK1Q9Y5R4 338 aaPredicted RBP16.2■□□□□ 0.18
SMG5-204ENST00000476954 ANKRD17O75179 2603 aaKnown RBP16.2■□□□□ 0.18
SMG5-204ENST00000476954 WNT9AO14904 365 aa16.19■□□□□ 0.18
SMG5-204ENST00000476954 EPB41L2O43491 1005 aaKnown RBP16.19■□□□□ 0.18
SMG5-204ENST00000476954 MT-CO3P00414 261 aa16.19■□□□□ 0.18
SMG5-204ENST00000476954 KRT18P05783 430 aaKnown RBP16.19■□□□□ 0.18
SMG5-204ENST00000476954 TMEM191BP0C7N4 346 aa16.19■□□□□ 0.18
SMG5-204ENST00000476954 EPHA8P29322 1005 aaPredicted RBP16.19■□□□□ 0.18
SMG5-204ENST00000476954 GNL1P36915 607 aaPredicted RBP16.19■□□□□ 0.18
SMG5-204ENST00000476954 SLC5A3P53794 718 aa16.19■□□□□ 0.18
SMG5-204ENST00000476954 MCM6Q14566 821 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms