RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CDK17Q00537 523 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 NNTQ13423 1086 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 TRIM68Q6AZZ1 485 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 WDR59Q6PJI9 974 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 TRIM67Q6ZTA4 783 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 MCOLN2Q8IZK6 566 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 EBF3Q9H4W6 596 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 RRN3Q9NYV6 651 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 ZNF510Q9Y2H8 683 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 COL4A2P08572 1712 aa30.83■■■□□ 2.53
HOXB3-208ENST00000476342 DLL1O00548 723 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 MSI1O43347 362 aaKnown RBP30.82■■■□□ 2.52
HOXB3-208ENST00000476342 RTN2O75298 545 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 NFATC1O95644 943 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 MATKP42679 507 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 TNK2Q07912 1038 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 RUNX3Q13761 415 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 TRIP4Q15650 581 aaPredicted RBP30.82■■■□□ 2.52
HOXB3-208ENST00000476342 EML3Q32P44 896 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 ARCQ7LC44 396 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 TAC4Q86UU9 113 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 CPA6Q8N4T0 437 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 DEF6Q9H4E7 631 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 ARHGEF3Q9NR81 526 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 METTL5Q9NRN9 209 aaKnown RBP30.82■■■□□ 2.52
HOXB3-208ENST00000476342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP30.82■■■□□ 2.526e-9■■■■□ 25.1
HOXB3-208ENST00000476342 GTSE1Q9NYZ3 720 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 CA14Q9ULX7 337 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 STAP1Q9ULZ2 295 aa30.82■■■□□ 2.52
HOXB3-208ENST00000476342 SSU72P8A0A1W2PR75 194 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 SCAMP3O14828 347 aaKnown RBP30.81■■■□□ 2.52
HOXB3-208ENST00000476342 HARS2P49590 506 aaKnown RBP30.81■■■□□ 2.52
HOXB3-208ENST00000476342 ITPRIPL2Q3MIP1 535 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 SLC44A4Q53GD3 710 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 BBS7Q8IWZ6 715 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 C3orf20Q8ND61 904 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 WBP2Q969T9 261 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 SELENOOQ9BVL4 669 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 LINC00597Q9H2U6 94 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 HPS4Q9NQG7 708 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 HEBP1Q9NRV9 189 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 TLR6Q9Y2C9 796 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 GREM1O60565 184 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 TRUB2O95900 331 aaKnown RBP30.81■■■□□ 2.52
HOXB3-208ENST00000476342 CORO1AP31146 461 aaKnown RBP30.81■■■□□ 2.52
HOXB3-208ENST00000476342 GBP1P32455 592 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 TBX4P57082 545 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 RING1Q06587 406 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 MLF2Q15773 248 aaPredicted RBP30.81■■■□□ 2.52
HOXB3-208ENST00000476342 NUGGCQ68CJ6 796 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 TC2NQ8N9U0 490 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 ADAM32Q8TC27 787 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 TRIM11Q96F44 468 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 EPHX3Q9H6B9 360 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 FAM204AQ9H8W3 233 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 TMEM59LQ9UK28 342 aa30.81■■■□□ 2.52
HOXB3-208ENST00000476342 FTLP02792 175 aaPredicted RBP30.8■■■□□ 2.52
HOXB3-208ENST00000476342 ARSAP15289 507 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 EIF4A3P38919 411 aaKnown RBP30.8■■■□□ 2.52
HOXB3-208ENST00000476342 PRKCQQ04759 706 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 NR1H3Q13133 447 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 MAPK8IP2Q13387 824 aaPredicted RBP30.8■■■□□ 2.52
HOXB3-208ENST00000476342 DNAJC24Q6P3W2 148 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.8■■■□□ 2.52
HOXB3-208ENST00000476342 PHLDB2Q86SQ0 1253 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 UNC45BQ8IWX7 931 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 SIX5Q8N196 739 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 MSANTD3Q96H12 275 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 SHDQ96IW2 340 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 ISCUQ9H1K1 167 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 ECT2Q9H8V3 914 aa30.8■■■□□ 2.52
HOXB3-208ENST00000476342 TECTAO75443 2155 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 IRAK2O43187 625 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 IGLV3-25P01717 112 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 IGLV3-27P01718 113 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 KRT3P12035 628 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 GLULP15104 373 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 MLLT6P55198 1093 aaPredicted RBP30.79■■■□□ 2.52
HOXB3-208ENST00000476342 Q6ZNB5 142 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 ADGRG2Q8IZP9 1017 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 C8orf33Q9H7E9 229 aaPredicted RBP30.79■■■□□ 2.52
HOXB3-208ENST00000476342 DDIT4Q9NX09 232 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 PIAS3Q9Y6X2 628 aa30.79■■■□□ 2.52
HOXB3-208ENST00000476342 A0A087X0T9 212 aa30.78■■■□□ 2.52
HOXB3-208ENST00000476342 FAM228BP0C875 321 aa30.78■■■□□ 2.52
HOXB3-208ENST00000476342 FLT3P36888 993 aa30.78■■■□□ 2.52
HOXB3-208ENST00000476342 GOLGA6L3A6NEY3 463 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 TMEM221A6NGB7 291 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 M0R296 226 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 LATS1O95835 1130 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 KLKB1P03952 638 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 MYBL1P10243 752 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 RRM1P23921 792 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 PITX1P78337 314 aaPredicted RBP30.77■■■□□ 2.52
HOXB3-208ENST00000476342 AMPD2Q01433 879 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 ALKBH5Q6P6C2 394 aaKnown RBP30.77■■■□□ 2.52
HOXB3-208ENST00000476342 C1orf228Q6PIY5 440 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 TPRG1Q6ZUI0 275 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 DENND1CQ8IV53 801 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 TTC8Q8TAM2 541 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms