RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 WASH3PC4AMC7 463 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 ZNF217O75362 1048 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 GJB3O75712 270 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 CD58P19256 250 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 RAB41Q5JT25 222 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 C10orf120Q5SQS8 335 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 FAM186BQ8IYM0 893 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 DEFB119Q8N690 84 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 ZNF419Q96HQ0 510 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-228ENST00000476267 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 SCNM1Q9BWG6 230 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 IMPG2Q9BZV3 1241 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 CACNA2D2Q9NY47 1150 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 PLK2Q9NYY3 685 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 NAGPAQ9UK23 515 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 CYP8B1Q9UNU6 501 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
MRPL55-228ENST00000476267 CKAP5Q14008 2032 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 A0A1W2PQD8 194 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 KIF20AO95235 890 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 CFIP05156 583 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 PSMC2P35998 433 aaKnown RBP13.78□□□□□ -0.2
MRPL55-228ENST00000476267 SYKP43405 635 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 MFAP3P55082 362 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 KRT39Q6A163 491 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 BHLHA9Q7RTU4 235 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 RABEPKQ7Z6M1 372 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 METTL3Q86U44 580 aaKnown RBP13.78□□□□□ -0.2
MRPL55-228ENST00000476267 FAM217AQ8IXS0 508 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 SLC4A11Q8NBS3 891 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 PIWIL1Q96J94 861 aaKnown RBP13.78□□□□□ -0.2
MRPL55-228ENST00000476267 HSPA12BQ96MM6 686 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 UBXN6Q9BZV1 441 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 GOLPH3LQ9H4A5 285 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 DNAAF2Q9NVR5 837 aaKnown RBP13.78□□□□□ -0.2
MRPL55-228ENST00000476267 ZMIZ1Q9ULJ6 1067 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 CEP295Q9C0D2 2601 aa13.78□□□□□ -0.2
MRPL55-228ENST00000476267 CHD6Q8TD26 2715 aa13.77□□□□□ -0.2
MRPL55-228ENST00000476267 ARHGAP33O14559 1287 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 HSP90AA1P07900 732 aaKnown RBP13.77□□□□□ -0.21
MRPL55-228ENST00000476267 CD59P13987 128 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 TRIM21P19474 475 aaKnown RBP13.77□□□□□ -0.21
MRPL55-228ENST00000476267 GTF2H1P32780 548 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 RAD23BP54727 409 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 FAM193AP78312 1265 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 GFPT1Q06210 699 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-228ENST00000476267 ADAM9Q13443 819 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 GEN1Q17RS7 908 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 EDRF1Q3B7T1 1238 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 FUT11Q495W5 492 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 ZNF394Q53GI3 561 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 FREM2Q5SZK8 3169 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 ARHGAP17Q68EM7 881 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 SDE2Q6IQ49 451 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 KRBA2Q6ZNG9 492 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 TADA2BQ86TJ2 420 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 ASCC3Q8N3C0 2202 aaKnown RBP13.77□□□□□ -0.21
MRPL55-228ENST00000476267 MINDY1Q8N5J2 469 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 TRIML1Q8N9V2 468 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 BHMTQ93088 406 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 ERLEC1Q96DZ1 483 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 SPATA32Q96LK8 384 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 CDK5RAP1Q96SZ6 601 aaKnown RBP13.77□□□□□ -0.21
MRPL55-228ENST00000476267 ARID3AQ99856 593 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 MKRN2Q9H000 416 aaKnown RBP13.77□□□□□ -0.21
MRPL55-228ENST00000476267 CISHQ9NSE2 258 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 USP36Q9P275 1121 aaKnown RBP13.77□□□□□ -0.21
MRPL55-228ENST00000476267 THAP10Q9P2Z0 257 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-228ENST00000476267 AGO1Q9UL18 857 aaKnown RBP13.77□□□□□ -0.21
MRPL55-228ENST00000476267 CLEC4EQ9ULY5 219 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 ZNF510Q9Y2H8 683 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 NEUROG3Q9Y4Z2 214 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 STON1Q9Y6Q2 735 aa13.77□□□□□ -0.21
MRPL55-228ENST00000476267 PI4KAP42356 2102 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 SPAARA0A1B0GVQ0 90 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 A0A1W2PQ27 194 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 A0A1W2PQ64 194 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 FAM221BA6H8Z2 402 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 TMEM8BA6NDV4 472 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 C7P10643 843 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 RALAP11233 206 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 KRT13P13646 458 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
MRPL55-228ENST00000476267 CORO1AP31146 461 aaKnown RBP13.76□□□□□ -0.21
MRPL55-228ENST00000476267 CHKAP35790 457 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 IL12RB1P42701 662 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 ZNF132P52740 706 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 KRT85P78386 507 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 COG7P83436 770 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 EFEMP1Q12805 493 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 TMEM215Q68D42 235 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 PM20D1Q6GTS8 502 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 PIGZQ86VD9 579 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 CPXM2Q8N436 756 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 FBXL13Q8NEE6 735 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 OR2I1PQ8NGU4 316 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 TMEM176AQ96HP8 235 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 SLC32A1Q9H598 525 aa13.76□□□□□ -0.21
MRPL55-228ENST00000476267 FAM124BQ9H5Z6 455 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms