RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 FAM207AQ9NSI2 230 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-206ENST00000475663 DNAJC17Q9NVM6 304 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-206ENST00000475663 TBC1D3BA6NDS4 549 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 HOXC11O43248 304 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 GRAP2O75791 330 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 APODP05090 189 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 NCAM1P13591 858 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 WASP42768 502 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 PITX1P78337 314 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 PTK2Q05397 1052 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 PDCLQ13371 301 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 ZNF528Q3MIS6 628 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 SYPL2Q5VXT5 272 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 ZC3H14Q6PJT7 736 aaKnown RBP13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 MAMSTRQ6ZN01 415 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 FAM71AQ8IYT1 594 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 PHTF2Q8N3S3 785 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 DCLK2Q8N568 766 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 ALLCQ8N6M5 410 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 KIAA1958Q8N8K9 716 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 IRGQQ8WZA9 623 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 NELL1Q92832 810 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 FAM81BQ96LP2 452 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 CPXM1Q96SM3 734 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 IER2Q9BTL4 223 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 NAA15Q9BXJ9 866 aaKnown RBP13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 NLRC4Q9NPP4 1024 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 DEC1Q9P2X7 70 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 CLEC4EQ9ULY5 219 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 SLC8A2Q9UPR5 921 aa13.75□□□□□ -0.21
NIPAL3-206ENST00000475663 GOLGA6L7A0A1B0GV03 622 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 SYCE3A1L190 88 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 HRO43593 1189 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 FBXO21O94952 628 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 KLF8O95600 359 aaPredicted RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 LMNAP02545 664 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 ERBB2P04626 1255 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 CHRM1P11229 460 aaPredicted RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 HNRNPLP14866 589 aaKnown RBP eCLIP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 ZNF18P17022 549 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 KRT9P35527 623 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 RPL34P49207 117 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 POLR2FP61218 127 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 DMC1Q14565 340 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 PPP2R5DQ14738 602 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 SYCP1Q15431 976 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 TRIP4Q15650 581 aaPredicted RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 FBXO43Q4G163 708 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 C2CD6Q53TS8 623 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 FKBP15Q5T1M5 1219 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 C10orf76Q5T2E6 689 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 GRAMD4Q6IC98 578 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 SCML4Q8N228 414 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 TXNDC5Q8NBS9 432 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 DQX1Q8TE96 717 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 EXOC4Q96A65 974 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 PCMTD1Q96MG8 357 aaPredicted RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 OLA1Q9NTK5 396 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 LIMA1Q9UHB6 759 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 HCN2Q9UL51 889 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 INVSQ9Y283 1065 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 PCDHGA2Q9Y5H1 932 aa13.74□□□□□ -0.21
NIPAL3-206ENST00000475663 VPS13AQ96RL7 3174 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 ATG2BQ96BY7 2078 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 PRRT4C9JH25 899 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 F8VZ95 297 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 LILRB5O75023 590 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 GFPT2O94808 682 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 TPM2P07951 284 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 CYP11B1P15538 503 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 GRIA2P42262 883 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 ACADSBP45954 432 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 SGSHP51688 502 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 UBXN1Q04323 297 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 OR6B2Q6IFH4 312 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 MSANTD2Q6P1R3 559 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 RFWD3Q6PCD5 774 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 PRR23BQ6ZRT6 265 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 APTXQ7Z2E3 356 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 TMEM110Q86TL2 294 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 NOP9Q86U38 636 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 TAC4Q86UU9 113 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 DHX40Q8IX18 779 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 IL17RCQ8NAC3 791 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 SUMF1Q8NBK3 374 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 SLC20A1Q8WUM9 679 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 GOLGA1Q92805 767 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 PLD4Q96BZ4 506 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 PPP1R13BQ96KQ4 1090 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 ACOX2Q99424 681 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 DCLK3Q9C098 648 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 PDCL3Q9H2J4 239 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 PCDHGC3Q9UN70 934 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 SIK3Q9Y2K2 1263 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 PIEZO1Q92508 2521 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 MYOFQ9NZM1 2061 aa13.73□□□□□ -0.21
NIPAL3-206ENST00000475663 DMDP11532 3685 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms