RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 B3GALNT2Q8NCR0 500 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 GRAMD1AQ96CP6 724 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 CEP41Q9BYV8 373 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.6□□□□□ -0.07
UBXN11-214ENST00000475591 DTLQ9NZJ0 730 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 ZC3H7BQ9UGR2 993 aaKnown RBP14.6□□□□□ -0.07
UBXN11-214ENST00000475591 CHKBQ9Y259 395 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 UNCXA6NJT0 531 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 VAV1P15498 845 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 DESP17661 470 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 RPL34P49207 117 aaKnown RBP14.6□□□□□ -0.07
UBXN11-214ENST00000475591 OVGP1Q12889 678 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 SEPT7Q16181 437 aaKnown RBP14.6□□□□□ -0.07
UBXN11-214ENST00000475591 DCAF6Q58WW2 860 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 XKR4Q5GH76 650 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 KIAA0319Q5VV43 1072 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 WSCD1Q658N2 575 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 TWF2Q6IBS0 349 aaKnown RBP14.6□□□□□ -0.07
UBXN11-214ENST00000475591 CTU1Q7Z7A3 348 aaKnown RBP14.6□□□□□ -0.07
UBXN11-214ENST00000475591 C2orf69Q8N8R5 385 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 LGMNQ99538 433 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 PIH1D1Q9NWS0 290 aaKnown RBP14.6□□□□□ -0.07
UBXN11-214ENST00000475591 IKBKGQ9Y6K9 419 aa14.6□□□□□ -0.07
UBXN11-214ENST00000475591 CFAP69A5D8W1 941 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 MGRN1O60291 552 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 LPXNO60711 386 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 NQO1P15559 274 aaKnown RBP14.59□□□□□ -0.07
UBXN11-214ENST00000475591 AXLP30530 894 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 SNX16P57768 344 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 SNCBQ16143 134 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 TRMT10BQ6PF06 316 aaKnown RBP14.59□□□□□ -0.07
UBXN11-214ENST00000475591 HFE2Q6ZVN8 426 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 PAQR9Q6ZVX9 377 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 CDKL3Q8IVW4 592 aaPredicted RBP14.59□□□□□ -0.07
UBXN11-214ENST00000475591 ERP27Q96DN0 273 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 FAM111AQ96PZ2 611 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 SSU72Q9NP77 194 aaKnown RBP14.59□□□□□ -0.07
UBXN11-214ENST00000475591 NPHS2Q9NP85 383 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 MAD1L1Q9Y6D9 718 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 USP3Q9Y6I4 520 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 MYADML2A6NDP7 307 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 A8MUI8 341 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 MFSD11O43934 449 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 RARBP10826 455 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 TSHRP16473 764 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 BMPR2Q13873 1038 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 SV2CQ496J9 727 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 PLEKHG4Q58EX7 1191 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 SYPL2Q5VXT5 272 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 CDHR3Q6ZTQ4 885 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 DENND5BQ6ZUT9 1274 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 SH2D5Q6ZV89 423 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 LIMS2Q7Z4I7 341 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 TP53INP2Q8IXH6 220 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 C10orf82Q8WW14 230 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 KLHL29Q96CT2 875 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 BAIAP2L1Q9UHR4 511 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 TIMM13Q9Y5L4 95 aaPredicted RBP14.59□□□□□ -0.07
UBXN11-214ENST00000475591 NUMBLQ9Y6R0 609 aa14.59□□□□□ -0.07
UBXN11-214ENST00000475591 IQANK1A0A1B0GTG1 560 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 C17orf102A2RUQ5 167 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 TRIM49D1C9J1S8 452 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 CYB561D2O14569 222 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 KRT16P08779 473 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 MATKP42679 507 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 SMAD1Q15797 465 aaKnown RBP14.58□□□□□ -0.07
UBXN11-214ENST00000475591 UNC5AQ6ZN44 842 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 VPS52Q8N1B4 723 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 QKIQ96PU8 341 aaKnown RBP eCLIP14.58□□□□□ -0.07
UBXN11-214ENST00000475591 PLCD4Q9BRC7 762 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 FZD10Q9ULW2 581 aa14.58□□□□□ -0.07
UBXN11-214ENST00000475591 XPO1O14980 1071 aaKnown RBP14.58□□□□□ -0.08
UBXN11-214ENST00000475591 ATP6V1G2O95670 118 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 CSH1P0DML2 217 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 CSH2P0DML3 217 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 IBSPP21815 317 aaPredicted RBP14.58□□□□□ -0.08
UBXN11-214ENST00000475591 PNPLA4P41247 253 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 CRYBB1P53674 252 aaPredicted RBP14.58□□□□□ -0.08
UBXN11-214ENST00000475591 CRADDP78560 199 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 NME3Q13232 169 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 PCBP1Q15365 356 aaKnown RBP eCLIP14.58□□□□□ -0.08
UBXN11-214ENST00000475591 MDH1BQ5I0G3 518 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 LRRC6Q86X45 466 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 VSIG1Q86XK7 387 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 UNC5BQ8IZJ1 945 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 GBP7Q8N8V2 638 aaPredicted RBP14.58□□□□□ -0.08
UBXN11-214ENST00000475591 RNF169Q8NCN4 708 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 RFWD2Q8NHY2 731 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 ADAM32Q8TC27 787 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 TTC17Q96AE7 1141 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 HSFY1Q96LI6 401 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 DUSP16Q9BY84 665 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 DCTN4Q9UJW0 460 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 STK38LQ9Y2H1 464 aa14.58□□□□□ -0.08
UBXN11-214ENST00000475591 TM9SF1O15321 606 aa14.57□□□□□ -0.08
UBXN11-214ENST00000475591 CREB3O43889 395 aa14.57□□□□□ -0.08
UBXN11-214ENST00000475591 GCATO75600 419 aa14.57□□□□□ -0.08
UBXN11-214ENST00000475591 PTPN1P18031 435 aaKnown RBP14.57□□□□□ -0.08
UBXN11-214ENST00000475591 TARSP26639 723 aaKnown RBP14.57□□□□□ -0.08
UBXN11-214ENST00000475591 MAGEA6P43360 314 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms