RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CADM4Q8NFZ8 388 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 PARD3BQ8TEW8 1205 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 UCMAQ8WVF2 138 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 HNRNPLLQ8WVV9 542 aaKnown RBP21.54■■□□□ 1.04
VPS36-203ENST00000475375 SIPA1Q96FS4 1042 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 ZSCAN16Q9H4T2 348 aaPredicted RBP21.54■■□□□ 1.04
VPS36-203ENST00000475375 NMUR1Q9HB89 426 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 TM7SF3Q9NS93 570 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 USP36Q9P275 1121 aaKnown RBP21.54■■□□□ 1.04
VPS36-203ENST00000475375 NAGPAQ9UK23 515 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 RAXQ9Y2V3 346 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 GOLGA8CPA6NN73 597 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 BCAT2O15382 392 aaPredicted RBP21.53■■□□□ 1.04
VPS36-203ENST00000475375 CBFA2T3O75081 653 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 CILPO75339 1184 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 VNN1O95497 513 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 C4BPAP04003 597 aaKnown RBP21.53■■□□□ 1.04
VPS36-203ENST00000475375 OXTRP30559 389 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 IL12RB1P42701 662 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 TPMTP51580 245 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 SGSM1Q2NKQ1 1148 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 SOWAHCQ53LP3 525 aaPredicted RBP21.53■■□□□ 1.04
VPS36-203ENST00000475375 IL27RAQ6UWB1 636 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 Q6ZNB5 142 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 GLRX5Q86SX6 157 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 TADA2BQ86TJ2 420 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 UNC93AQ86WB7 457 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 TMPRSS6Q8IU80 811 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 CRYBG2Q8N1P7 616 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 LINC00301Q8NCQ3 95 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 PRCCQ92733 491 aaPredicted RBP21.53■■□□□ 1.04
VPS36-203ENST00000475375 ITM2CQ9NQX7 267 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.53■■□□□ 1.04
VPS36-203ENST00000475375 MTMR6Q9Y217 621 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 FNDC3AQ9Y2H6 1198 aaKnown RBP21.53■■□□□ 1.04
VPS36-203ENST00000475375 NFE2L3Q9Y4A8 694 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 PCDHA5Q9Y5H7 936 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 MYH10P35580 1976 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 ACACAQ13085 2346 aa21.53■■□□□ 1.04
VPS36-203ENST00000475375 KCNJ18B7U540 433 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 STC2O76061 302 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 KIF20AO95235 890 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 HMBSP08397 361 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 KLHDC10Q6PID8 442 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 CLEC20AQ6ZU45 233 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 GOLGA5Q8TBA6 731 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 SNX19Q92543 992 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 THAP10Q9P2Z0 257 aaPredicted RBP21.52■■□□□ 1.04
VPS36-203ENST00000475375 EIF2B4Q9UI10 523 aaKnown RBP21.52■■□□□ 1.04
VPS36-203ENST00000475375 FBXO10Q9UK96 956 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 SLC27A6Q9Y2P4 619 aa21.52■■□□□ 1.04
VPS36-203ENST00000475375 APC2O95996 2303 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 IGSF10Q6WRI0 2623 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 NPC1O15118 1278 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 STX6O43752 255 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 RALAP11233 206 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 ZNF132P52740 706 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 MFAP3P55082 362 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 EHHADHQ08426 723 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 GEN1Q17RS7 908 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 HLA-BQ31612 363 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 SPOPLQ6IQ16 392 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 FAM124AQ86V42 546 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 RHBDD1Q8TEB9 315 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 LRIG1Q96JA1 1093 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 NUP58Q9BVL2 599 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 CIPCQ9C0C6 399 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 FOXD4L1Q9NU39 408 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 RASAL2Q9UJF2 1139 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 ZNF510Q9Y2H8 683 aa21.51■■□□□ 1.03
VPS36-203ENST00000475375 EIF4E1BA6NMX2 242 aaKnown RBP21.5■■□□□ 1.03
VPS36-203ENST00000475375 METTL12A8MUP2 240 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 HHLA1C9JL84 531 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 POLR2DO15514 142 aaKnown RBP21.5■■□□□ 1.03
VPS36-203ENST00000475375 PPP6R2O75170 966 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 PENKP01210 267 aaPredicted RBP21.5■■□□□ 1.03
VPS36-203ENST00000475375 RPN1P04843 607 aaKnown RBP21.5■■□□□ 1.03
VPS36-203ENST00000475375 ZNF883P0CG24 379 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 CHKAP35790 457 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 PIK3CAP42336 1068 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 DLG4P78352 724 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 CLDN10P78369 228 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 ARID5AQ03989 594 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 SHC4Q6S5L8 630 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 TAF4BQ92750 862 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 CYFIP2Q96F07 1278 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 P2RY11Q96G91 374 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 HNRNPABQ99729 332 aaKnown RBP21.5■■□□□ 1.03
VPS36-203ENST00000475375 CDC6Q99741 560 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 MAGEF1Q9HAY2 307 aa21.5■■□□□ 1.03
VPS36-203ENST00000475375 KIAA1522Q9P206 1035 aaPredicted RBP21.5■■□□□ 1.03
VPS36-203ENST00000475375 FLRT2O43155 660 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 CUTAO60888 179 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 KLKB1P03952 638 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 CYBBP04839 570 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 ATXN1LP0C7T5 689 aaKnown RBP21.49■■□□□ 1.03
VPS36-203ENST00000475375 AFMP43652 599 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 ASPAP45381 313 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 ZNF234Q14588 700 aa21.49■■□□□ 1.03
VPS36-203ENST00000475375 E2F5Q15329 346 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms