RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 INTS2Q9H0H0 1204 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 ZNF700Q9H0M5 742 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 STMN4Q9H169 189 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 VPS11Q9H270 941 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 DENND2DQ9H6A0 471 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 DCLRE1BQ9H816 532 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 SP140LQ9H930 580 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 UCK1Q9HA47 277 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 SSU72Q9NP77 194 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 STMN3Q9NZ72 180 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 EDARQ9UNE0 448 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 GPR55Q9Y2T6 319 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 PCDHA8Q9Y5H6 950 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 STON1Q9Y6Q2 735 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 UNC13BO14795 1591 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 PASKQ96RG2 1323 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 CYP2D7A0A087X1C5 515 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 TEX51A0A1B0GUA7 166 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 PI4K2BG5E9Z4 385 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 AQP7O14520 342 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 NDUFA2O43678 99 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 MAFO75444 373 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 RHOBTB3O94955 611 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ALX3O95076 343 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 F2P00734 622 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 IFNA14P01570 189 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 SCG5P05408 212 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 SNRPAP09012 282 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 OCM2P0CE71 109 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 OCMP0CE72 109 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 DRD4P21917 467 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 GRK2P25098 689 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ADSLP30566 484 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ADD2P35612 726 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 IARSP41252 1262 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 CCR3P51677 355 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 RTP1P59025 263 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 CAP1Q01518 475 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ACAP2Q15057 778 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 CAMK4Q16566 473 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 NFIL3Q16649 462 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 DUOXA2Q1HG44 320 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 C1orf228Q6PIY5 440 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 CRTC1Q6UUV9 634 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 LRIG3Q6UXM1 1119 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ARHGAP36Q6ZRI8 547 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 CCDC129Q6ZRS4 1044 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 C11orf57Q6ZUT1 292 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 DYMQ7RTS9 669 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 KCTD20Q7Z5Y7 419 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 DDX53Q86TM3 631 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 STK32CQ86UX6 486 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 TICAM1Q8IUC6 712 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 TMEM139Q8IV31 216 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 CCDC28AQ8IWP9 274 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 IFNL3Q8IZI9 196 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 AGGF1Q8N302 714 aaeCLIP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 TERB1Q8NA31 727 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 XXYLT1Q8NBI6 393 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 FLAD1Q8NFF5 587 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 SYTL5Q8TDW5 730 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 UCMAQ8WVF2 138 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ANKS1AQ92625 1134 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 FATE1Q969F0 183 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 TRIM63Q969Q1 353 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ARL8AQ96BM9 186 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 FAM167AQ96KS9 214 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ZDHHC15Q96MV8 337 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 BIRC8Q96P09 236 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 NOX5Q96PH1 765 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 NEURL2Q9BR09 285 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 KIAA1683Q9H0B3 1180 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 KCTD10Q9H3F6 313 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 NCOR1P1Q9H4R4 102 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ECT2Q9H8V3 914 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 MARCH7Q9H992 704 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 CYP4F12Q9HCS2 524 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 PPANQ9NQ55 473 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 STARD7Q9NQZ5 370 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 CYP26B1Q9NR63 512 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 POLE3Q9NRF9 147 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 OBP2AQ9NY56 170 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 IL37Q9NZH6 218 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 IFNKQ9P0W0 207 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 PCDHA12Q9UN75 941 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 TDRKHQ9Y2W6 561 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 SHPRHQ149N8 1683 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ZNF804BA4D1E1 1349 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 MAP3K19Q56UN5 1328 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 ADAMTS13Q76LX8 1427 aa6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 COL16A1Q07092 1604 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-215ENST00000475319 FAM237AA0A1B0GTK4 181 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 SIGLEC16A6NMB1 481 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 CBX4O00257 560 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 O00370 1275 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 E2F3O00716 465 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 IKBKBO14920 756 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 POLR1CO15160 346 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms