RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 ESRRBO95718 433 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 EGFRP00533 1210 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 TFE3P19532 575 aaPredicted RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 PPARGP37231 505 aaPredicted RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 CDC42EP1Q00587 391 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 NIPA1Q7RTP0 329 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 PTAR1Q7Z6K3 402 aaPredicted RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 EME1Q96AY2 570 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 PHF21BQ96EK2 531 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 SLITRK1Q96PX8 696 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 SYT15Q9BQS2 421 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 B3GNT5Q9BYG0 378 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 FAM96AQ9H5X1 160 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 PIDD1Q9HB75 910 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 AKT1P31749 480 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 PNPLA4P41247 253 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 GTF2A2P52657 109 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 YWHAZP63104 245 aaKnown RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 RRP1BQ14684 758 aaKnown RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 ZC3H12AQ5D1E8 599 aaKnown RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 ERMARDQ5T6L9 678 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 JOSD2Q8TAC2 188 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 DACT3Q96B18 629 aaPredicted RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 MAGEB18Q96M61 343 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 TMEM120AQ9BXJ8 343 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 NEUROG2Q9H2A3 272 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 GOLGA2P5Q9HBQ8 144 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 NT5MQ9NPB1 228 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 RBM22Q9NW64 420 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDH23-211ENST00000475158 WRAP73Q9P2S5 460 aaPredicted RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 SLC8A2Q9UPR5 921 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 DPPA5A6NC42 116 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 RTN3O95197 1032 aaPredicted RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 PGK1P00558 417 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 USP17L7P0C7H9 530 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 ADARP55265 1226 aaKnown RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 AUHQ13825 339 aaKnown RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 CSHL1Q14406 222 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 FKBP1CQ5VVH2 108 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 SIX5Q8N196 739 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 HES6Q96HZ4 224 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 GPRC5DQ9NZD1 345 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 AJAP1Q9UKB5 411 aaPredicted RBP9.92□□□□□ -0.82
CDH23-211ENST00000475158 COG5Q9UP83 839 aa9.92□□□□□ -0.82
CDH23-211ENST00000475158 BDNFP23560 247 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 HMOX2P30519 316 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 RPA3P35244 121 aaPredicted RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 SLC26A2P50443 739 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 BST2Q10589 180 aaKnown RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 PDK2Q15119 407 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 RASA2Q15283 850 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 TLK2Q86UE8 772 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 FBXO32Q969P5 355 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 WNK4Q96J92 1243 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 GPR63Q9BZJ6 419 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 C12orf65Q9H3J6 166 aaKnown RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 CATSPERBQ9H7T0 1116 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 CACYBPQ9HB71 228 aaKnown RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 HPS4Q9NQG7 708 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 TBC1D23Q9NUY8 699 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 RUVBL2Q9Y230 463 aaKnown RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 ERI2A8K979 691 aaKnown RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 KDELR1P24390 212 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 NOMO3P69849 1222 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 JAG1P78504 1218 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 MPP3Q13368 585 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 DDX39BQ13838 428 aaKnown RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 KPNB1Q14974 876 aaKnown RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 SNX30Q5VWJ9 437 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 POLNQ7Z5Q5 900 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 FICDQ9BVA6 458 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 PIF1Q9H611 641 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 BTBD7Q9P203 1132 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 SHOC2Q9UQ13 582 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 MON2Q7Z3U7 1717 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 ANKRD26Q9UPS8 1709 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 CACNA1FO60840 1977 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 IGLV3-22A0A075B6J6 115 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 SLC12A8A0AV02 714 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 MEI4A8MW99 385 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 RNF103O00237 685 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 WEE1P30291 646 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 NNMTP40261 264 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 N4BP2L1Q5TBK1 243 aaPredicted RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 WSCD1Q658N2 575 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 SLC27A1Q6PCB7 646 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 HS6ST3Q8IZP7 471 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 SRPK1Q96SB4 655 aaKnown RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 MRPL1Q9BYD6 325 aaKnown RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 ULBP1Q9BZM6 244 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 CYP3A43Q9HB55 503 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 AVENQ9NQS1 362 aaPredicted RBP9.91□□□□□ -0.82
CDH23-211ENST00000475158 CD274Q9NZQ7 290 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 PKP3Q9Y446 797 aa9.91□□□□□ -0.82
CDH23-211ENST00000475158 PHGDHO43175 533 aaKnown RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 RHOBTB1O94844 696 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 VAPBO95292 243 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 RALBP11234 206 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms