RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TKTL1P51854 596 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 NRLP54845 237 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 PITX1P78337 314 aaPredicted RBP10.18□□□□□ -0.78
USP39-214ENST00000474572 BASP1P80723 227 aaKnown RBP10.18□□□□□ -0.78
USP39-214ENST00000474572 SEMA3BQ13214 749 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 NOGQ13253 232 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 TUSC3Q13454 348 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 MPP2Q14168 576 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 PAFAH1B3Q15102 231 aaKnown RBP10.18□□□□□ -0.78
USP39-214ENST00000474572 TPSAB1Q15661 275 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 TIGD5Q53EQ6 642 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 TRAF7Q6Q0C0 670 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 ADGRD1Q6QNK2 874 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 DSTYKQ6XUX3 929 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 BEND5Q7L4P6 421 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 PIGWQ7Z7B1 504 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 SIX6OS1Q8N1H7 587 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 SLC43A3Q8NBI5 491 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 FBXO36Q8NEA4 188 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 DENND1AQ8TEH3 1009 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 PYROXD1Q8WU10 500 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 MZB1Q8WU39 189 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 IRGQQ8WZA9 623 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 LRRC39Q96DD0 335 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 SGSM3Q96HU1 749 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 SEC16BQ96JE7 1060 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 ACBD6Q9BR61 282 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 ULBP1Q9BZM6 244 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 WDR6Q9NNW5 1121 aaKnown RBP10.18□□□□□ -0.78
USP39-214ENST00000474572 TMEM30AQ9NV96 361 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 ETNK2Q9NVF9 386 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 RNF186Q9NXI6 227 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 DTLQ9NZJ0 730 aa10.18□□□□□ -0.78
USP39-214ENST00000474572 PSMC3IPQ9P2W1 217 aaPredicted RBP10.18□□□□□ -0.78
USP39-214ENST00000474572 DDX20Q9UHI6 824 aaKnown RBP10.18□□□□□ -0.78
USP39-214ENST00000474572 ABT1Q9ULW3 272 aaKnown RBP10.18□□□□□ -0.78
USP39-214ENST00000474572 CASTOR2A6NHX0 329 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 H3BRJ5 948 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 GOLGA8MH3BSY2 632 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 TMEM189-UBE2V1I3L0A0 370 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 BANF1O75531 89 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 AP1G2O75843 785 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 OAS1P00973 400 aaKnown RBP10.17□□□□□ -0.78
USP39-214ENST00000474572 GSTA2P09210 222 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 TYMPP19971 482 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 SSTR1P30872 391 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 ARL4AP40617 200 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 NDUFV1P49821 464 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 CACNA2D1P54289 1103 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 MAP3K7CLP57077 242 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 GEMIN4P57678 1058 aaKnown RBP10.17□□□□□ -0.78
USP39-214ENST00000474572 SP3Q02447 781 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 GBE1Q04446 702 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 DEUP1Q05D60 604 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 SEMA5AQ13591 1074 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 ITGA7Q13683 1181 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 DPYSQ14117 519 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 PRKD1Q15139 912 aaPredicted RBP10.17□□□□□ -0.78
USP39-214ENST00000474572 TMED2Q15363 201 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 PPP6R3Q5H9R7 873 aaPredicted RBP10.17□□□□□ -0.78
USP39-214ENST00000474572 INTS6LQ5JSJ4 861 aaKnown RBP10.17□□□□□ -0.78
USP39-214ENST00000474572 SYPL2Q5VXT5 272 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 PM20D1Q6GTS8 502 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 HFE2Q6ZVN8 426 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 ZNF534Q76KX8 674 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 BZW1Q7L1Q6 419 aaKnown RBP10.17□□□□□ -0.78
USP39-214ENST00000474572 FAM131BQ86XD5 332 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 ECHDC2Q86YB7 292 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 ANKMY2Q8IV38 441 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 LRRC34Q8IZ02 419 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 AGGF1Q8N302 714 aaeCLIP10.17□□□□□ -0.78
USP39-214ENST00000474572 RNF169Q8NCN4 708 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 RNF139Q8WU17 664 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 FAM149B1Q96BN6 582 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 SMARCD1Q96GM5 515 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 PRMT1Q99873 361 aaKnown RBP10.17□□□□□ -0.78
USP39-214ENST00000474572 PAAF1Q9BRP4 392 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 MED10Q9BTT4 135 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 MAGEB5Q9BZ81 275 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 KLC2Q9H0B6 622 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 VPS37BQ9H9H4 285 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 ARHGEF4Q9NR80 690 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 RAB6BQ9NRW1 208 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 SRRDQ9UH36 339 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 DSEQ9UL01 958 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 SMG5Q9UPR3 1016 aaKnown RBP10.17□□□□□ -0.78
USP39-214ENST00000474572 HEY1Q9Y5J3 304 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 RAD54BQ9Y620 910 aa10.17□□□□□ -0.78
USP39-214ENST00000474572 ARHGEF37A1IGU5 675 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 MOXD2PA6NHM9 499 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 FAM47DPA6NHR8 397 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 RASA4BC9J798 803 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 M0QYT0 321 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 KIF3CO14782 793 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 DCLK1O15075 740 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 RASA4O43374 803 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 TYROBPO43914 113 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 MFSD11O43934 449 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 ASMTLO95671 621 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 LTFP02788 710 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms