RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ARL4AP40617 200 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 SLC11A2P49281 568 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 DNA2P51530 1060 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 TBX4P57082 545 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 CKAP4Q07065 602 aaKnown RBP10.77□□□□□ -0.69
COL12A1-206ENST00000474564 PDK2Q15119 407 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 TRIP4Q15650 581 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-206ENST00000474564 C15orf59Q2T9L4 293 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-206ENST00000474564 ERMARDQ5T6L9 678 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 SYPL2Q5VXT5 272 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 HFE2Q6ZVN8 426 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 SCD5Q86SK9 330 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 VN1R2Q8NFZ6 395 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 DQX1Q8TE96 717 aaKnown RBP10.77□□□□□ -0.69
COL12A1-206ENST00000474564 TEKT4Q8WW24 435 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 CENPIQ92674 756 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-206ENST00000474564 KHSRPQ92945 711 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL12A1-206ENST00000474564 NT5C3BQ969T7 300 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 DCLK3Q9C098 648 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 ZWILCHQ9H900 591 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 PCSK1NQ9UHG2 260 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 ZNF510Q9Y2H8 683 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 PCDHA3Q9Y5H8 950 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 UQCRHLA0A096LP55 91 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 A0A1W2PRU2 124 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 CES2O00748 559 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 DAPK3O43293 454 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 LRCH4O75427 683 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 RFPL2O75678 378 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 ENDOD1O94919 500 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 SLU7O95391 586 aaKnown RBP10.76□□□□□ -0.69
COL12A1-206ENST00000474564 F11P03951 625 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 UQCRHP07919 91 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 RHOP08100 348 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 CTNNA1P35221 906 aaKnown RBP10.76□□□□□ -0.69
COL12A1-206ENST00000474564 MTHFRP42898 656 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 EPHA5P54756 1037 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 COPS2P61201 443 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 RING1Q06587 406 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 HYAL1Q12794 435 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 ADAM15Q13444 863 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 PPP2R5DQ14738 602 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 GRIN2CQ14957 1233 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 RARS2Q5T160 578 aaKnown RBP10.76□□□□□ -0.69
COL12A1-206ENST00000474564 ANKRD54Q6NXT1 300 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 TMC5Q6UXY8 1006 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 LRRC31Q6UY01 552 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 GRASPQ7Z6J2 395 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-206ENST00000474564 MIB1Q86YT6 1006 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 KATNAL2Q8IYT4 538 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 MICALL1Q8N3F8 863 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 CEP112Q8N8E3 955 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 EXD1Q8NHP7 514 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-206ENST00000474564 HSPH1Q92598 858 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 PLD4Q96BZ4 506 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 HES6Q96HZ4 224 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 PIWIL1Q96J94 861 aaKnown RBP10.76□□□□□ -0.69
COL12A1-206ENST00000474564 TRIM7Q9C029 511 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 TASP1Q9H6P5 420 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 PRDM16Q9HAZ2 1276 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 NMUR1Q9HB89 426 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 CLDND1Q9NY35 253 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 SNX12Q9UMY4 172 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 SH3BP1Q9Y3L3 701 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 MTCH2Q9Y6C9 303 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 GBF1Q92538 1859 aa10.76□□□□□ -0.69
COL12A1-206ENST00000474564 TYW5A2RUC4 315 aaKnown RBP10.75□□□□□ -0.69
COL12A1-206ENST00000474564 LRRD1A4D1F6 860 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 H3BRJ5 948 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 ENC1O14682 589 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 IRAK2O43187 625 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 KRT1P04264 644 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 ZFXP17010 805 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-206ENST00000474564 FSHRP23945 695 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 ADRA1BP35368 520 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 CXCR3P49682 368 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 OGDHQ02218 1023 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 TFDP2Q14188 446 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 SKIV2LQ15477 1246 aaKnown RBP10.75□□□□□ -0.69
COL12A1-206ENST00000474564 GPR158Q5T848 1215 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 PAPD7Q5XG87 772 aaKnown RBP10.75□□□□□ -0.69
COL12A1-206ENST00000474564 CCDC70Q6NSX1 233 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 GPR149Q86SP6 731 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 TAC4Q86UU9 113 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 FAM131BQ86XD5 332 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 CCDC117Q8IWD4 279 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-206ENST00000474564 HS6ST3Q8IZP7 471 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 MAB21L3Q8N8X9 362 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 ADAM32Q8TC27 787 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 NTAN1Q96AB6 310 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 BTN2A3PQ96KV6 586 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 NECTIN4Q96NY8 510 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 HAPLN3Q96S86 360 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 EPAS1Q99814 870 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 CALN1Q9BXU9 219 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 TKTL2Q9H0I9 626 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 CARD9Q9H257 536 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 ADAM7Q9H2U9 754 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 DHX35Q9H5Z1 703 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms