RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SMOC1Q9H4F8 434 aa21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 ZDHHC4Q9NPG8 344 aa21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 OLA1Q9NTK5 396 aaKnown RBP21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 KHNYNO15037 678 aaKnown RBP21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 TRIM24O15164 1050 aa21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 ADRB1P08588 477 aa21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 SETSIPP0DME0 302 aa21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 CORO1AP31146 461 aaKnown RBP21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 DPP6P42658 865 aa21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 DHPSP49366 369 aaPredicted RBP21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 PDE4CQ08493 712 aa21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 E2F5Q15329 346 aa21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 CHPFQ8IZ52 775 aa21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 NT5C1BQ96P26 610 aa21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 IPO9Q96P70 1041 aaKnown RBP21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 RXFP3Q9NSD7 469 aa21.34■■□□□ 1.01
PDLIM4-206ENST00000474421 GFRA2O00451 464 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 P4HA2O15460 535 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 PENKP01210 267 aaPredicted RBP21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 KLKB1P03952 638 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 CYBBP04839 570 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 PAEPP09466 180 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 CISD3P0C7P0 127 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 LRMPQ12912 555 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 MAP7D1Q3KQU3 841 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 EGFLAMQ63HQ2 1017 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 ISM2Q6H9L7 571 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 TCEAL6Q6IPX3 200 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 SIX6OS1Q8N1H7 587 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 RLN3Q8WXF3 142 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 TCEAL3Q969E4 200 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 PLD4Q96BZ4 506 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 EDEM2Q9BV94 578 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 ULBP1Q9BZM6 244 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 FBXO10Q9UK96 956 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 SLC27A6Q9Y2P4 619 aa21.33■■□□□ 1.01
PDLIM4-206ENST00000474421 SLC12A8A0AV02 714 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 O00370 1275 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 TM4SF5O14894 197 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 GNA14O95837 355 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 HMBSP08397 361 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 CD44P16070 742 aaKnown RBP21.32■■□□□ 1
PDLIM4-206ENST00000474421 STILQ15468 1287 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 KLHL10Q6JEL2 608 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 TTI2Q6NXR4 508 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 SLC36A4Q6YBV0 504 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 TOGARAM2Q6ZUX3 1019 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 CPXM2Q8N436 756 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 UBR7Q8N806 425 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 RNF139Q8WU17 664 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 NELFBQ8WX92 580 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 KCTD13Q8WZ19 329 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 BHMTQ93088 406 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 GABRG3Q99928 467 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 AGO1Q9UL18 857 aaKnown RBP21.32■■□□□ 1
PDLIM4-206ENST00000474421 HCN2Q9UL51 889 aa21.32■■□□□ 1
PDLIM4-206ENST00000474421 GON4LQ3T8J9 2241 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 A0A1W2PQF6 199 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 PRRT4C9JH25 899 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 NPC1O15118 1278 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 ZNF217O75362 1048 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 GABRG2P18507 467 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 ADIGQ0VDE8 80 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 FYB2Q5VWT5 728 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 TMEM270Q6UE05 265 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 LCLAT1Q6UWP7 414 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 DENND1CQ8IV53 801 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 SCML4Q8N228 414 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 PPM1KQ8N3J5 372 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 IPO4Q8TEX9 1081 aaKnown RBP21.31■■□□□ 1
PDLIM4-206ENST00000474421 UCMAQ8WVF2 138 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 PIGKQ92643 395 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 CNGB3Q9NQW8 809 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 PLK2Q9NYY3 685 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 HBS1LQ9Y450 684 aaKnown RBP21.31■■□□□ 1
PDLIM4-206ENST00000474421 PCDHB4Q9Y5E5 795 aa21.31■■□□□ 1
PDLIM4-206ENST00000474421 TPRP12270 2363 aaKnown RBP21.3■■□□□ 1
PDLIM4-206ENST00000474421 CEP192Q8TEP8 1941 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 LNP1A1A4G5 178 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 PPP1R3GB7ZBB8 358 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 TULP2O00295 520 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 AP5Z1O43299 807 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 PI4KAP42356 2102 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 WASP42768 502 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 HARS2P49590 506 aaKnown RBP21.3■■□□□ 1
PDLIM4-206ENST00000474421 MORC3Q14149 939 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 DAB2IPQ5VWQ8 1189 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 TMEFF1Q8IYR6 380 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 UBA3Q8TBC4 463 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 LSM14BQ9BX40 385 aaKnown RBP21.3■■□□□ 1
PDLIM4-206ENST00000474421 SLC2A11Q9BYW1 496 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 ABCC13Q9NSE7 274 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 CALCOCO1Q9P1Z2 691 aa21.3■■□□□ 1
PDLIM4-206ENST00000474421 EVLQ9UI08 416 aaPredicted RBP21.3■■□□□ 1
PDLIM4-206ENST00000474421 MBD1Q9UIS9 605 aaPredicted RBP21.3■■□□□ 1
PDLIM4-206ENST00000474421 TNRC6BQ9UPQ9 1833 aaKnown RBP21.29■■□□□ 1
PDLIM4-206ENST00000474421 KCNA4P22459 653 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 HOXD12P35452 270 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 ZNF132P52740 706 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms