RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 DCAF8Q5TAQ9 597 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 VWA5B1Q5TIE3 1220 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 POTEAQ6S8J7 498 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 SPATA18Q8TC71 538 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 LIN28AQ9H9Z2 209 aaKnown RBP19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 RSL24D1Q9UHA3 163 aaKnown RBP19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 RIMS3Q9UJD0 308 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 DKC1O60832 514 aaKnown RBP eCLIP19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 TRPA1O75762 1119 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 MRPS22P82650 360 aaKnown RBP19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 RFX6Q8HWS3 928 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 ERI1Q8IV48 349 aaKnown RBP19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 PNPOQ9NVS9 261 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 ARHGAP26Q9UNA1 814 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 NUB1Q9Y5A7 615 aa19.23■□□□□ 0.67
ECHDC1-214ENST00000474289 RGPD3A6NKT7 1758 aaPredicted RBP19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 RGPD4Q7Z3J3 1758 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 CHADO15335 359 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 FUT4P22083 530 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 GARTP22102 1010 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 KCNA4P22459 653 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 PSMA2P25787 234 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 PHEXP78562 749 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 ENPEPQ07075 957 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 ACAP1Q15027 740 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 C16orf46Q6P387 395 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 ANKRD23Q86SG2 305 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 THNSL1Q8IYQ7 743 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 CSRNP1Q96S65 589 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 TRIM56Q9BRZ2 755 aaKnown RBP19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 DHX33Q9H6R0 707 aaKnown RBP19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 FAF1Q9UNN5 650 aaPredicted RBP19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 TRDMT1O14717 391 aaKnown RBP19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 DCXO43602 365 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 KRT7P08729 469 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 COX4I1P13073 169 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 CPA3P15088 417 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 EIF4BP23588 611 aaKnown RBP19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 RFC1P35251 1148 aaPredicted RBP19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 PSMD6Q15008 389 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 PDK1Q15118 436 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 KIAA0319LQ8IZA0 1049 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 IL31RAQ8NI17 732 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 RAB6BQ9NRW1 208 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 HOMER2Q9NSB8 354 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 DNAJC28Q9NX36 388 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 STK39Q9UEW8 545 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 PADI4Q9UM07 663 aa19.22■□□□□ 0.67
ECHDC1-214ENST00000474289 ZNF189O75820 626 aaPredicted RBP19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 APOEP02649 317 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 MYL4P12829 197 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 STT3AP46977 705 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 TAP1Q03518 808 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 ADRM1Q16186 407 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 TRMT10BQ6PF06 316 aaKnown RBP19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 Q6ZNX1 250 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 LILRA2Q8N149 483 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 ACER1Q8TDN7 264 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 SORT1Q99523 831 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 COPS7BQ9H9Q2 264 aaPredicted RBP19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 INIPQ9NRY2 104 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 HERC5Q9UII4 1024 aaKnown RBP19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 SH3PXD2BA1X283 911 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 ZNF195O14628 629 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 THRAP10827 490 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 ARRB2P32121 409 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 GABRB2P47870 512 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 NLRP11P59045 1033 aaKnown RBP19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 ROR1Q01973 937 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 DARS2Q6PI48 645 aaKnown RBP19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 POTEHQ6S545 545 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 NPNTQ6UXI9 565 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 C4orf19Q8IY42 314 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 GALNT4Q8N4A0 578 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 CATSPER1Q8NEC5 780 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 ADCY4Q8NFM4 1077 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 SLC35B4Q969S0 331 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 C8orf37Q96NL8 207 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 IDI2Q9BXS1 227 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 EMCNQ9ULC0 261 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 BARX2Q9UMQ3 279 aaPredicted RBP19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 WDR37Q9Y2I8 494 aa19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 MRPL11Q9Y3B7 192 aaKnown RBP19.21■□□□□ 0.67
ECHDC1-214ENST00000474289 ACOT2P49753 483 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 ZNF132P52740 706 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 UNC5AQ6ZN44 842 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 PATL1Q86TB9 770 aaKnown RBP19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 CAND1Q86VP6 1230 aaKnown RBP19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 TMEM126BQ8IUX1 230 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 TMIGD2Q96BF3 282 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 NTPCRQ9BSD7 190 aaKnown RBP19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 SLC2A11Q9BYW1 496 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 AGO4Q9HCK5 861 aaKnown RBP19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 SRCAPQ6ZRS2 3230 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 ZBTB14O43829 449 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 EXTL3O43909 919 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 STAM2O75886 525 aa19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 PORP16435 677 aaPredicted RBP19.2■□□□□ 0.66
ECHDC1-214ENST00000474289 OSBPP22059 807 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms