RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 BBS2Q9BXC9 721 aa21.32■■□□□ 1
APP-215ENST00000474136 TSPY26PQ9H489 355 aa21.32■■□□□ 1
APP-215ENST00000474136 HSPBP1Q9NZL4 362 aa21.32■■□□□ 1
APP-215ENST00000474136 KIAA0391O15091 583 aaKnown RBP21.31■■□□□ 1
APP-215ENST00000474136 CACNG3O60359 315 aa21.31■■□□□ 1
APP-215ENST00000474136 ZDHHC11BP0C7U3 371 aa21.31■■□□□ 1
APP-215ENST00000474136 TYRP14679 529 aa21.31■■□□□ 1
APP-215ENST00000474136 CD6P30203 668 aa21.31■■□□□ 1
APP-215ENST00000474136 TNNC1P63316 161 aa21.31■■□□□ 1
APP-215ENST00000474136 PAQR9Q6ZVX9 377 aa21.31■■□□□ 1
APP-215ENST00000474136 STXBP4Q6ZWJ1 553 aa21.31■■□□□ 1
APP-215ENST00000474136 FAM35AQ86V20 835 aa21.31■■□□□ 1
APP-215ENST00000474136 ZCCHC9Q8N567 271 aaKnown RBP21.31■■□□□ 1
APP-215ENST00000474136 RDH13Q8NBN7 331 aa21.31■■□□□ 1
APP-215ENST00000474136 SCFD1Q8WVM8 642 aa21.31■■□□□ 1
APP-215ENST00000474136 FUCA2Q9BTY2 467 aa21.31■■□□□ 1
APP-215ENST00000474136 NACA2Q9H009 215 aa21.31■■□□□ 1
APP-215ENST00000474136 IL37Q9NZH6 218 aa21.31■■□□□ 1
APP-215ENST00000474136 SETXQ7Z333 2677 aaKnown RBP21.31■■□□□ 1
APP-215ENST00000474136 MEI4A8MW99 385 aa21.3■■□□□ 1
APP-215ENST00000474136 BIN1O00499 593 aa21.3■■□□□ 1
APP-215ENST00000474136 TBX18O95935 607 aa21.3■■□□□ 1
APP-215ENST00000474136 HOXD13P35453 343 aa21.3■■□□□ 1
APP-215ENST00000474136 TUBP50607 506 aa21.3■■□□□ 1
APP-215ENST00000474136 BNC1Q01954 994 aa21.3■■□□□ 1
APP-215ENST00000474136 EHHADHQ08426 723 aa21.3■■□□□ 1
APP-215ENST00000474136 COBLL1Q53SF7 1204 aa21.3■■□□□ 1
APP-215ENST00000474136 DNASE2BQ8WZ79 361 aa21.3■■□□□ 1
APP-215ENST00000474136 TOE1Q96GM8 510 aaKnown RBP21.3■■□□□ 1
APP-215ENST00000474136 XPO6Q96QU8 1125 aaKnown RBP21.3■■□□□ 1
APP-215ENST00000474136 MED10Q9BTT4 135 aa21.3■■□□□ 1
APP-215ENST00000474136 ZDHHC5Q9C0B5 715 aa21.3■■□□□ 1
APP-215ENST00000474136 MIR1-1HGQ9H1L0 117 aa21.3■■□□□ 1
APP-215ENST00000474136 NXF1Q9UBU9 619 aaKnown RBP21.3■■□□□ 1
APP-215ENST00000474136 FNDC3AQ9Y2H6 1198 aaKnown RBP21.3■■□□□ 1
APP-215ENST00000474136 URB1O60287 2271 aaKnown RBP21.3■■□□□ 1
APP-215ENST00000474136 BPTFQ12830 3046 aa21.3■■□□□ 1
APP-215ENST00000474136 A0A1B0GTW7 788 aa21.29■■□□□ 1
APP-215ENST00000474136 FAM163BP0C2L3 166 aa21.29■■□□□ 1
APP-215ENST00000474136 CISD3P0C7P0 127 aa21.29■■□□□ 1
APP-215ENST00000474136 TNNI1P19237 187 aa21.29■■□□□ 1
APP-215ENST00000474136 MYL6P60660 151 aa21.29■■□□□ 1
APP-215ENST00000474136 FAM26FQ5R3K3 315 aa21.29■■□□□ 1
APP-215ENST00000474136 HTR3DQ70Z44 454 aa21.29■■□□□ 1
APP-215ENST00000474136 TMPRSS7Q7RTY8 843 aa21.29■■□□□ 1
APP-215ENST00000474136 BHMTQ93088 406 aa21.29■■□□□ 1
APP-215ENST00000474136 P2RY11Q96G91 374 aa21.29■■□□□ 1
APP-215ENST00000474136 CRELD1Q96HD1 420 aa21.29■■□□□ 1
APP-215ENST00000474136 GPR174Q9BXC1 333 aa21.29■■□□□ 1
APP-215ENST00000474136 KLF16Q9BXK1 252 aaPredicted RBP21.29■■□□□ 1
APP-215ENST00000474136 GAREM1Q9H706 876 aa21.29■■□□□ 1
APP-215ENST00000474136 SMYD3Q9H7B4 428 aa21.29■■□□□ 1
APP-215ENST00000474136 TOR4AQ9NXH8 423 aa21.29■■□□□ 1
APP-215ENST00000474136 WSB2Q9NYS7 404 aaPredicted RBP21.29■■□□□ 1
APP-215ENST00000474136 TLR5O60602 858 aa21.29■■□□□ 1
APP-215ENST00000474136 ATXN1LP0C7T5 689 aaKnown RBP21.29■■□□□ 1
APP-215ENST00000474136 NCAM1P13591 858 aa21.29■■□□□ 1
APP-215ENST00000474136 CDH8P55286 799 aa21.29■■□□□ 1
APP-215ENST00000474136 FUT11Q495W5 492 aa21.29■■□□□ 1
APP-215ENST00000474136 ZNF516Q92618 1163 aa21.29■■□□□ 1
APP-215ENST00000474136 ELMO3Q96BJ8 720 aa21.29■■□□□ 1
APP-215ENST00000474136 CCDC127Q96BQ5 260 aa21.29■■□□□ 1
APP-215ENST00000474136 CGRRF1Q99675 332 aa21.29■■□□□ 1
APP-215ENST00000474136 PRDM16Q9HAZ2 1276 aa21.29■■□□□ 1
APP-215ENST00000474136 DMAP1Q9NPF5 467 aaPredicted RBP21.29■■□□□ 1
APP-215ENST00000474136 SCUBE2Q9NQ36 999 aa21.29■■□□□ 1
APP-215ENST00000474136 PLK2Q9NYY3 685 aa21.29■■□□□ 1
APP-215ENST00000474136 MARK1Q9P0L2 795 aa21.29■■□□□ 1
APP-215ENST00000474136 KIAA1522Q9P206 1035 aaPredicted RBP21.29■■□□□ 1
APP-215ENST00000474136 FAM92AA1XBS5 289 aa21.28■■□□□ 1
APP-215ENST00000474136 EIF4E1BA6NMX2 242 aaKnown RBP21.28■■□□□ 1
APP-215ENST00000474136 GOLGA8CPA6NN73 597 aa21.28■■□□□ 1
APP-215ENST00000474136 KCNJ18B7U540 433 aa21.28■■□□□ 1
APP-215ENST00000474136 CILPO75339 1184 aa21.28■■□□□ 1
APP-215ENST00000474136 DGKGP49619 791 aa21.28■■□□□ 1
APP-215ENST00000474136 CYP4F3Q08477 520 aa21.28■■□□□ 1
APP-215ENST00000474136 SNRNP35Q16560 246 aaKnown RBP21.28■■□□□ 1
APP-215ENST00000474136 ZMIZ2Q8NF64 920 aa21.28■■□□□ 1
APP-215ENST00000474136 BAHD1Q8TBE0 780 aaPredicted RBP21.28■■□□□ 1
APP-215ENST00000474136 MKRN2Q9H000 416 aaKnown RBP21.28■■□□□ 1
APP-215ENST00000474136 XYLT2Q9H1B5 865 aa21.28■■□□□ 1
APP-215ENST00000474136 TM7SF3Q9NS93 570 aa21.28■■□□□ 1
APP-215ENST00000474136 USP36Q9P275 1121 aaKnown RBP21.28■■□□□ 1
APP-215ENST00000474136 WDR35Q9P2L0 1181 aa21.28■■□□□ 1
APP-215ENST00000474136 STON1Q9Y6Q2 735 aa21.28■■□□□ 1
APP-215ENST00000474136 GFRA2O00451 464 aa21.27■□□□□ 0.99
APP-215ENST00000474136 FLNBO75369 2602 aaKnown RBP21.27■□□□□ 0.99
APP-215ENST00000474136 AP1G2O75843 785 aa21.27■□□□□ 0.99
APP-215ENST00000474136 BEST1O76090 585 aa21.27■□□□□ 0.99
APP-215ENST00000474136 ERCC5P28715 1186 aaPredicted RBP21.27■□□□□ 0.99
APP-215ENST00000474136 PSMD6Q15008 389 aa21.27■□□□□ 0.99
APP-215ENST00000474136 DCAF12L1Q5VU92 463 aa21.27■□□□□ 0.99
APP-215ENST00000474136 ISM2Q6H9L7 571 aa21.27■□□□□ 0.99
APP-215ENST00000474136 COL26A1Q96A83 441 aa21.27■□□□□ 0.99
APP-215ENST00000474136 SMOQ99835 787 aa21.27■□□□□ 0.99
APP-215ENST00000474136 KIAA1586Q9HCI6 787 aa21.27■□□□□ 0.99
APP-215ENST00000474136 KRT82Q9NSB4 513 aa21.27■□□□□ 0.99
APP-215ENST00000474136 DKK4Q9UBT3 224 aa21.27■□□□□ 0.99
APP-215ENST00000474136 PTPRBP23467 1997 aa21.26■□□□□ 0.99
APP-215ENST00000474136 ATP8B3O60423 1300 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms