RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ETFBKMTQ8IXQ9 262 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 EPS8L1Q8TE68 723 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 IER2Q9BTL4 223 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 AGO1Q9UL18 857 aaKnown RBP19.79■□□□□ 0.76
PTCD3-210ENST00000473829 RNF40O75150 1001 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 GFPT2O94808 682 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 ERBB2P04626 1255 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 TDGF1P13385 188 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 GAD2Q05329 585 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 TAF5Q15542 800 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 TRIP4Q15650 581 aaPredicted RBP19.78■□□□□ 0.76
PTCD3-210ENST00000473829 PTPN20Q4JDL3 420 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 TPGS1Q6ZTW0 290 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 DENND1CQ8IV53 801 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 PHTF2Q8N3S3 785 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 SYNPOQ8N3V7 929 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 SPEM1Q8N4L4 309 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 NAT16Q8N8M0 369 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 SLC20A1Q8WUM9 679 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 FAM149B1Q96BN6 582 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 PLD4Q96BZ4 506 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 PPP1R13BQ96KQ4 1090 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 PCMTD1Q96MG8 357 aaPredicted RBP19.78■□□□□ 0.76
PTCD3-210ENST00000473829 IRF2BPLQ9H1B7 796 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 RTN4Q9NQC3 1192 aaKnown RBP19.78■□□□□ 0.76
PTCD3-210ENST00000473829 NOCTQ9UK39 431 aaKnown RBP19.78■□□□□ 0.76
PTCD3-210ENST00000473829 FBXO4Q9UKT5 387 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 NAALADL1Q9UQQ1 740 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 USP34Q70CQ2 3546 aa19.78■□□□□ 0.76
PTCD3-210ENST00000473829 TRIM24O15164 1050 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 NCAM1P13591 858 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 CDH5P33151 784 aaPredicted RBP19.77■□□□□ 0.76
PTCD3-210ENST00000473829 SOX5P35711 763 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 CSTF1Q05048 431 aaKnown RBP19.77■□□□□ 0.76
PTCD3-210ENST00000473829 KDSRQ06136 332 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 ANO4Q32M45 955 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 MAMSTRQ6ZN01 415 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 NEK11Q8NG66 645 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 DQX1Q8TE96 717 aaKnown RBP19.77■□□□□ 0.76
PTCD3-210ENST00000473829 GOLGA1Q92805 767 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 BHMTQ93088 406 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 DCLK3Q9C098 648 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 POLR3BQ9NW08 1133 aaPredicted RBP19.77■□□□□ 0.76
PTCD3-210ENST00000473829 MARK1Q9P0L2 795 aa19.77■□□□□ 0.76
PTCD3-210ENST00000473829 HBS1LQ9Y450 684 aaKnown RBP19.77■□□□□ 0.76
PTCD3-210ENST00000473829 NEDD8-MDP1E9PL57 170 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 K7EQS6 105 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 SART1O43290 800 aaKnown RBP19.76■□□□□ 0.75
PTCD3-210ENST00000473829 TULP3O75386 442 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 IGLV3-27P01718 113 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 MMEP08473 750 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 CHRM1P11229 460 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-210ENST00000473829 EIF2DP41214 584 aaKnown RBP19.76■□□□□ 0.75
PTCD3-210ENST00000473829 CCR3P51677 355 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 SKOR2Q2VWA4 1001 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-210ENST00000473829 SYPL2Q5VXT5 272 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 FAM183BPQ6ZVS7 135 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 NAP1L5Q96NT1 182 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-210ENST00000473829 SPAG5Q96R06 1193 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 PNKPQ96T60 521 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 BBS2Q9BXC9 721 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 DAAM1Q9Y4D1 1078 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 R4GN57 208 aa19.76■□□□□ 0.75
PTCD3-210ENST00000473829 K7ESF4 209 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 TYRP14679 529 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 NBL1P41271 181 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 CXCL12P48061 93 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 SEC13P55735 322 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 PITX1P78337 314 aaPredicted RBP19.75■□□□□ 0.75
PTCD3-210ENST00000473829 ZNF528Q3MIS6 628 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 OLFML1Q6UWY5 402 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 TAC4Q86UU9 113 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 FAM217AQ8IXS0 508 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 RPLP0P6Q8NHW5 317 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 ADAM32Q8TC27 787 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 EXOC4Q96A65 974 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 ARHGEF4Q9NR80 690 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 PLK2Q9NYY3 685 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 ZNF510Q9Y2H8 683 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 CEP83Q9Y592 693 aa19.75■□□□□ 0.75
PTCD3-210ENST00000473829 A0A1B0GTH6 734 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 CACNG3O60359 315 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 KAT7O95251 611 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 CHRNB2P17787 502 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 STAT1P42224 750 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 YWHAZP63104 245 aaKnown RBP19.74■□□□□ 0.75
PTCD3-210ENST00000473829 NOMO3P69849 1222 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 FMO1Q01740 532 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 DMWDQ09019 674 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 FBXO43Q4G163 708 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 FYB2Q5VWT5 728 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 BEND5Q7L4P6 421 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 TMEM35BQ8NCS4 154 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 NELL1Q92832 810 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 NOX5Q96PH1 765 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 PDCL3Q9H2J4 239 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 POPDC2Q9HBU9 364 aa19.74■□□□□ 0.75
PTCD3-210ENST00000473829 DNAJC17Q9NVM6 304 aaKnown RBP19.74■□□□□ 0.75
PTCD3-210ENST00000473829 CHURC1-FNTBB4DL54 471 aa19.73■□□□□ 0.75
PTCD3-210ENST00000473829 GRAP2O75791 330 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms