RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 FAM47CQ5HY64 1035 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 MROH9Q5TGP6 573 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 ARID3BQ8IVW6 561 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-214ENST00000473778 MRPL45Q9BRJ2 306 aaKnown RBP11.34□□□□□ -0.59
C9orf3-214ENST00000473778 DCLRE1BQ9H816 532 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 PIH1D1Q9NWS0 290 aaKnown RBP11.34□□□□□ -0.59
C9orf3-214ENST00000473778 GJD2Q9UKL4 321 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 MTO1Q9Y2Z2 717 aaKnown RBP11.34□□□□□ -0.59
C9orf3-214ENST00000473778 PPME1Q9Y570 386 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 DNAJC25-GNG10A0A024R161 153 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 E7ENQ6 273 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 APOL1O14791 398 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 ZBED1O96006 694 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 IL1BP01584 269 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 APOEP02649 317 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 PDHA1P08559 390 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 SNRPAP09012 282 aaKnown RBP11.34□□□□□ -0.59
C9orf3-214ENST00000473778 LINGO3P0C6S8 592 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 NEFHP12036 1026 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 ATP6V1C1P21283 382 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 OSBPP22059 807 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 GMPRP36959 345 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 CCNFP41002 786 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 MAGEA6P43360 314 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 CRADDP78560 199 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 ZBTB16Q05516 673 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 TFDP2Q14188 446 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 CHI3L2Q15782 390 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 SMAD1Q15797 465 aaKnown RBP11.34□□□□□ -0.59
C9orf3-214ENST00000473778 ACOT1Q86TX2 421 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 ADGRF2Q8IZF7 708 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 DTX3LQ8TDB6 740 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 CLMNQ96JQ2 1002 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 CLPTM1LQ96KA5 538 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 PGLYRP2Q96PD5 576 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 EBF4Q9BQW3 602 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 OSBPL1AQ9BXW6 950 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 CYP3A43Q9HB55 503 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 PCMTD2Q9NV79 361 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 GPRC5DQ9NZD1 345 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 SIRPGQ9P1W8 387 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 BCLAF3A2AJT9 711 aaKnown RBP11.33□□□□□ -0.6
C9orf3-214ENST00000473778 SPAG6O75602 509 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 TXNP10599 105 aaKnown RBP11.33□□□□□ -0.6
C9orf3-214ENST00000473778 TMEM132DQ14C87 1099 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 KRT72Q14CN4 511 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 SLC5A9Q2M3M2 681 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 FAM136AQ96C01 138 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 ZNF333Q96JL9 665 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 MIS12Q9H081 205 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 NRDE2Q9H7Z3 1164 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 PRMT7Q9NVM4 692 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-214ENST00000473778 MTMR10Q9NXD2 777 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 DPP3Q9NY33 737 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 ZNF180Q9UJW8 692 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 WASF2Q9Y6W5 498 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 DPPA5A6NC42 116 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 H3BRJ5 948 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 HBP1O60381 514 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 MCF2P10911 925 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 TGM2P21980 687 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 CYP2F1P24903 491 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 ATICP31939 592 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 IRX4P78413 519 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 TMPRSS15P98073 1019 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 MOB2Q70IA6 237 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 KBTBD2Q8IY47 623 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 LINC01465Q8N7H1 131 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 SH3TC2Q8TF17 1288 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 SLC35F5Q8WV83 523 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 UCMAQ8WVF2 138 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 ZNF778Q96MU6 729 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 ZMAT2Q96NC0 199 aaKnown RBP11.33□□□□□ -0.6
C9orf3-214ENST00000473778 MMP19Q99542 508 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 SYT15Q9BQS2 421 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 NT5C1AQ9BXI3 368 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 NFKBIZQ9BYH8 718 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 DPEP3Q9H4B8 488 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 SMARCAD1Q9H4L7 1026 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 ASB7Q9H672 318 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 RBPJLQ9UBG7 517 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 RPL26L1Q9UNX3 145 aaKnown RBP11.33□□□□□ -0.6
C9orf3-214ENST00000473778 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-214ENST00000473778 MAD1L1Q9Y6D9 718 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 BRCA2P51587 3418 aa11.33□□□□□ -0.6
C9orf3-214ENST00000473778 DPYSL4O14531 572 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 CAPN9O14815 690 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 HNRNPCL1O60812 293 aaKnown RBP11.32□□□□□ -0.6
C9orf3-214ENST00000473778 KRT37O76014 449 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 ENO1P06733 434 aaKnown RBP11.32□□□□□ -0.6
C9orf3-214ENST00000473778 ESRRAP11474 423 aaPredicted RBP11.32□□□□□ -0.6
C9orf3-214ENST00000473778 L1CAMP32004 1257 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 PDK2Q15119 407 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 FAM187BQ17R55 369 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 SNX30Q5VWJ9 437 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 NDUFAF2Q8N183 169 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 PYROXD2Q8N2H3 581 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 C7orf31Q8N865 590 aa11.32□□□□□ -0.6
C9orf3-214ENST00000473778 RBM15BQ8NDT2 890 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms