RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 DCTN4Q9UJW0 460 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 NUMBLQ9Y6R0 609 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 TRIOO75962 3097 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 A0A0G2JND7 137 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 CCDC162PA2VCL2 907 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 E9PMD0 336 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 M0R296 226 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 PIK3CDO00329 1044 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 EML1O00423 815 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 KLF11O14901 512 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 GRM6O15303 877 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 EIF3DO15371 548 aaKnown RBP eCLIP10.47□□□□□ -0.73
APTX-216ENST00000472896 LINC01565O15544 149 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 MARCH6O60337 910 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 TDP2O95551 362 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 CLPTM1O96005 669 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 F2P00734 622 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 LINC00271P0C7V0 271 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 VARSP26640 1264 aaKnown RBP10.47□□□□□ -0.73
APTX-216ENST00000472896 SLC12A3P55017 1021 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 TMEM62Q0P6H9 643 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 CCDC142Q17RM4 750 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 C1orf146Q5VVC0 180 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 PCNX4Q63HM2 1172 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 RAPH1Q70E73 1250 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 BMP8AQ7Z5Y6 402 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 FBXO11Q86XK2 927 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 FAM186BQ8IYM0 893 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 ZNF276Q8N554 614 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 ALLCQ8N6M5 410 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 ZNF564Q8TBZ8 553 aaPredicted RBP10.47□□□□□ -0.73
APTX-216ENST00000472896 DQX1Q8TE96 717 aaKnown RBP10.47□□□□□ -0.73
APTX-216ENST00000472896 TRPC4APQ8TEL6 797 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 C1orf54Q8WWF1 131 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 VPS50Q96JG6 964 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 C9orf72Q96LT7 481 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 RBM15Q96T37 977 aaKnown RBP eCLIP10.47□□□□□ -0.73
APTX-216ENST00000472896 YME1L1Q96TA2 773 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 SIKE1Q9BRV8 207 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 UBA5Q9GZZ9 404 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 KCNK13Q9HB14 408 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 PLGRKTQ9HBL7 147 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 ARHGEF4Q9NR80 690 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 KCNK4Q9NYG8 393 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 PCDHA12Q9UN75 941 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 SORCS3Q9UPU3 1222 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 KIAA1024Q9UPX6 916 aa10.47□□□□□ -0.73
APTX-216ENST00000472896 CAPN14A8MX76 684 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 POC1B-GALNT4F8VUJ3 575 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 CLDN3O15551 220 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 LRRN2O75325 713 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 DLDP09622 509 aaKnown RBP10.46□□□□□ -0.74
APTX-216ENST00000472896 GOLGA8HP0CJ92 632 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 PLS3P13797 630 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 PIK3CAP42336 1068 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 MTTPP55157 894 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 GSTM4Q03013 218 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 PTP4A2Q12974 167 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 MSLNQ13421 630 aaPredicted RBP10.46□□□□□ -0.74
APTX-216ENST00000472896 CCNG2Q16589 344 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 USP41Q3LFD5 358 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 GRAMD4Q6IC98 578 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 DHRS4L2Q6PKH6 230 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 TRIM67Q6ZTA4 783 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 ANO5Q75V66 913 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 SERINC5Q86VE9 423 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 AHI1Q8N157 1196 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 C4orf33Q8N1A6 199 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 ICA1LQ8NDH6 482 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 PLEKHO2Q8TD55 490 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 PBXIP1Q96AQ6 731 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 BIRC8Q96P09 236 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 UNC45AQ9H3U1 944 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 IGFLR1Q9H665 355 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 ZNF696Q9H7X3 374 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 FAM86C1Q9NVL1 165 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 DNAJC17Q9NVM6 304 aaKnown RBP10.46□□□□□ -0.74
APTX-216ENST00000472896 TMEM260Q9NX78 707 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 NFASCO94856 1347 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 UBE4BO95155 1302 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 ATG2AQ2TAZ0 1938 aa10.46□□□□□ -0.74
APTX-216ENST00000472896 C15orf38-AP3S2A0A0A6YYH1 394 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 SH3PXD2BA1X283 911 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 PDE5AO76074 875 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 OR6B1O95007 311 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 TFAP2AP05549 437 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 GAP43P17677 238 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 RRM1P23921 792 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 PHBP35232 272 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 HOXD13P35453 343 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 GALK1P51570 392 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 PTPN5P54829 565 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 ARL4CP56559 192 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 LAMC2Q13753 1193 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 PRKD1Q15139 912 aaPredicted RBP10.45□□□□□ -0.74
APTX-216ENST00000472896 STXBP2Q15833 593 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 SFT2D3Q587I9 215 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 ARSHQ5FYA8 562 aa10.45□□□□□ -0.74
APTX-216ENST00000472896 EFHC2Q5JST6 749 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms