RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 A0A1W2PQF6 199 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 MAFO75444 373 aaPredicted RBP2.9□□□□□ -1.94
XRN1-210ENST00000472697 MT-ND3P03897 115 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 CYBBP04839 570 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 CNPP09543 421 aaKnown RBP2.9□□□□□ -1.94
XRN1-210ENST00000472697 LAMP2P13473 410 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 PNLIPP16233 465 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 TNFRSF8P28908 595 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 KIR2DL3P43628 341 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 FAM189BP81408 668 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 STK4Q13043 487 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 SCARB2Q14108 478 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 PCOLCEQ15113 449 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 ZNF750Q32MQ0 723 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 DUSP28Q4G0W2 176 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 DCAF17Q5H9S7 520 aaPredicted RBP2.9□□□□□ -1.94
XRN1-210ENST00000472697 KRBOX4Q5JUW0 171 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 KIAA0930Q6ICG6 404 aaPredicted RBP2.9□□□□□ -1.94
XRN1-210ENST00000472697 TAF2Q6P1X5 1199 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 SERPINA13PQ6UXR4 307 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 SEM1Q6ZVN7 128 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 ZDHHC13Q8IUH4 622 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 FAM126BQ8IXS8 530 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 SFRP1Q8N474 314 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 AVL9Q8NBF6 648 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 IL17RDQ8NFM7 739 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 GIMAP7Q8NHV1 300 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 NSUN4Q96CB9 384 aaKnown RBP2.9□□□□□ -1.94
XRN1-210ENST00000472697 FAM167AQ96KS9 214 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 TMEM237Q96Q45 408 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 NR1H4Q96RI1 486 aaPredicted RBP2.9□□□□□ -1.94
XRN1-210ENST00000472697 TREX2Q9BQ50 279 aaPredicted RBP2.9□□□□□ -1.94
XRN1-210ENST00000472697 ZSWIM1Q9BR11 485 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 TEX101Q9BY14 249 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 TPSG1Q9NRR2 321 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 SNX15Q9NRS6 342 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 CFDP1Q9UEE9 299 aaPredicted RBP2.9□□□□□ -1.94
XRN1-210ENST00000472697 Q9UFV3 132 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 ZHX1Q9UKY1 873 aaPredicted RBP2.9□□□□□ -1.94
XRN1-210ENST00000472697 RAXQ9Y2V3 346 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 ADAM18Q9Y3Q7 739 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 ABCC3O15438 1527 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 ATP10BO94823 1461 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 DNMT1P26358 1616 aaKnown RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 FAM237BA0A1B0GVD1 139 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 BICDL2A1A5D9 508 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 SLC43A1O75387 559 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 SLCO2B1O94956 709 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 KNG1P01042 644 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 HMGCRP04035 888 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 GNAI3P08754 354 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 SPARCP09486 303 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 CD86P42081 329 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 PIK3CAP42336 1068 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 PAFAH1B1P43034 410 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 KIR2DL1P43626 348 aaPredicted RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 KIR2DL2P43627 348 aaPredicted RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 KCNJ1P48048 391 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 GNAI1P63096 354 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 ADAM8P78325 824 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 MSMPQ1L6U9 139 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 ZNF674Q2M3X9 581 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 PABPC1LQ4VXU2 614 aaKnown RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 ARHGAP40Q5TG30 622 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 TMEM200BQ69YZ2 307 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 PAQR3Q6TCH7 311 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 TMEM108Q6UXF1 575 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 MCM10Q7L590 875 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 MRPS27Q92552 414 aaKnown RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 KTI12Q96EK9 354 aaPredicted RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 CALML4Q96GE6 196 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 MARS2Q96GW9 593 aaKnown RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 SPATA25Q9BR10 227 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 LSM14BQ9BX40 385 aaKnown RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 ABCG4Q9H172 646 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 IKZF4Q9H2S9 585 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 CCDC134Q9H6E4 229 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 ZNF552Q9H707 407 aaPredicted RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 DBNDD1Q9H9R9 158 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 RGS17Q9UGC6 210 aaPredicted RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 SERTAD3Q9UJW9 196 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 PADI1Q9ULC6 663 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 C19orf53Q9UNZ5 99 aaPredicted RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 XIRP1Q702N8 1843 aaKnown RBP2.9□□□□□ -1.95
XRN1-210ENST00000472697 MLH3Q9UHC1 1453 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 SPHKAPQ2M3C7 1700 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 FGD6Q6ZV73 1430 aa2.9□□□□□ -1.95
XRN1-210ENST00000472697 FLT1P17948 1338 aa2.89□□□□□ -1.95
XRN1-210ENST00000472697 NWD1Q149M9 1564 aa2.89□□□□□ -1.95
XRN1-210ENST00000472697 LOC105369274A0A096LPK9 316 aa2.89□□□□□ -1.95
XRN1-210ENST00000472697 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.89□□□□□ -1.95
XRN1-210ENST00000472697 LOC102723532A0A0G2JNH3 316 aa2.89□□□□□ -1.95
XRN1-210ENST00000472697 MBD3L4A6NDZ8 208 aaPredicted RBP2.89□□□□□ -1.95
XRN1-210ENST00000472697 MBD3L3A6NE82 208 aaPredicted RBP2.89□□□□□ -1.95
XRN1-210ENST00000472697 RGS10O43665 173 aa2.89□□□□□ -1.95
XRN1-210ENST00000472697 USP12O75317 370 aa2.89□□□□□ -1.95
XRN1-210ENST00000472697 TADA2AO75478 443 aa2.89□□□□□ -1.95
XRN1-210ENST00000472697 GNAI2P04899 355 aa2.89□□□□□ -1.95
XRN1-210ENST00000472697 RPLP2P05387 115 aaKnown RBP2.89□□□□□ -1.95
XRN1-210ENST00000472697 FBLN1P23142 703 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms